| SRR4457263 | 2nd_leaf | DAH36 | 3.21 | MC |
| SRR358795 | callus | wt | 5.56 | MC |
| SRR358796 | callus | wt | 9.05 | MC |
| SRR358797 | callus | wt | 7.41 | MC |
| SRR358798 | callus | wt | 7.89 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 3.49 | MC |
| SRR4947495 | root | control | 3.79 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.90 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.56 | MC |
| SRR976168 | flag_leaf | wild_type | 2.85 | MC |
| SRR8240824 | leaf | wild_type | 0.63 | MC |
| SRR8240825 | leaf | wild_type | 0.86 | MC |
| SRR8240826 | leaf | wild_type | 0.47 | MC |
| SRR8240818 | leaf | wild_type | 0.49 | MC |
| SRR8240819 | leaf | wild_type | 0.64 | MC |
| SRR8240820 | leaf | wild_type | 0.77 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.89 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.71 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.76 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.72 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 5.24 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 5.68 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 5.68 | MC |
| SRR1761530 | leaf | control | 5.68 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.20 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.68 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.07 | MC |
| SRR6417968 | leaf | H2O_control | 2.75 | MC |
| SRR6417969 | leaf | H2O_control | 3.52 | MC |
| SRR8611900 | leaf | Non-inoculated | 3.38 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.28 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.03 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.46 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.02 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.24 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.52 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.75 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.21 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.52 | MC |
| SRR6168973 | leaf | none (control) | 2.84 | MC |
| SRR6168974 | leaf | none (control) | 4.21 | MC |
| SRR6168975 | leaf | none (control) | 1.82 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.15 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.60 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.77 | MC |
| SRR6168979 | leaf | none (control) | 1.24 | MC |
| SRR6168980 | leaf | none (control) | 1.30 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.59 | MC |
| SRR8582888 | panicle | AM | 2.82 | MC |
| SRR8582889 | panicle | AM | 1.30 | MC |
| SRR8582891 | panicle | PM | 4.50 | MC |
| SRR8582892 | panicle | PM | 5.61 | MC |
| SRR8582893 | panicle | PM | 3.92 | MC |
| SRR4947496 | root | control | 1.86 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.78 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.25 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.75 | MC |
| SRR4947478 | root | control | 4.24 | MC |
| SRR4947479 | root | control | 2.97 | MC |
| SRR4947480 | root | control | 2.79 | MC |
| SRR4947481 | root | control | 5.01 | MC |
| SRR4947484 | root | Al | 2.54 | MC |
| SRR4947485 | root | Al | 3.87 | MC |
| SRR4947488 | root | control | 3.15 | MC |
| SRR4947489 | root | control | 3.43 | MC |
| SRR4947491 | root | Al | 3.91 | MC |
| SRR4947492 | root | Al | 3.55 | MC |
| SRR4947493 | root | Al | 3.70 | MC |
| SRR4947494 | root | control | 4.06 | MC |
| SRR4947497 | root | control | 2.78 | MC |
| SRR4947498 | root | Al | 4.37 | MC |
| SRR4947499 | root | Al | 3.64 | MC |
| SRR4947500 | root | Al | 4.11 | MC |
| SRR4947501 | root | Al | 3.96 | MC |
| SRR4947502 | root | control | 3.78 | MC |
| SRR4947503 | root | control | 4.44 | MC |
| SRR4947504 | root | control | 4.35 | MC |
| SRR4947505 | root | control | 3.36 | MC |
| SRR4947508 | root | Al | 3.72 | MC |
| SRR4947509 | root | Al | 4.21 | MC |
| SRR6502094 | root | control | 4.49 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.67 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.64 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.64 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.36 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.04 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.53 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.41 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.82 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.19 | MC |
| SRR1944583 | seedling | no_treatment | 3.51 | MC |
| SRR358793 | seedling | wt | 1.56 | MC |
| SRR358794 | seedling | wt | 1.09 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.56 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.72 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.94 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.09 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.36 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.91 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.75 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.94 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.35 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.68 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.65 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.40 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.43 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.60 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.34 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.44 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.83 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.05 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 4.40 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 4.26 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 4.25 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 4.98 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 6.59 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 3.16 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.96 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.10 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.18 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 2.46 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.56 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.41 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 4.04 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 3.78 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 2.83 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 3.27 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 2.94 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 4.01 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 3.27 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 4.34 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 2.15 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 4.43 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 6.71 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 5.93 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 7.31 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.88 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 8.24 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 5.83 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 6.69 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 6.10 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 4.81 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.36 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.60 | MC |