| SRR4457263 | 2nd_leaf | DAH36 | 3.56 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 4.55 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.27 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 5.44 | MC |
| SRR3745125 | anther | wt | 4.85 | MC |
| SRR3745126 | anther | wt | 3.93 | MC |
| SRR3745127 | anther | wt | 2.68 | MC |
| SRR358795 | callus | wt | 7.30 | MC |
| SRR358796 | callus | wt | 7.39 | MC |
| SRR358797 | callus | wt | 6.66 | MC |
| SRR358798 | callus | wt | 8.25 | MC |
| SRR6320473 | carpel | wt | 4.57 | MC |
| SRR6320498 | carpel | wt | 4.06 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.44 | MC |
| SRR7265400 | coleoptile | 2dA | 3.04 | MC |
| SRR7265401 | coleoptile | 2dA | 2.46 | MC |
| SRR7265402 | coleoptile | 2dA | 2.52 | MC |
| SRR7265403 | coleoptile | 2dN | 3.85 | MC |
| SRR7265404 | coleoptile | 2dN | 3.25 | MC |
| SRR7265405 | coleoptile | 2dN | 3.61 | MC |
| SRR7265406 | coleoptile | 3dA | 2.18 | MC |
| SRR7265407 | coleoptile | 3dA | 1.79 | MC |
| SRR7265408 | coleoptile | 3dA | 1.00 | MC |
| SRR7265409 | coleoptile | 3dN | 3.50 | MC |
| SRR7265410 | coleoptile | 3dN | 2.92 | MC |
| SRR7265411 | coleoptile | 3dN | 2.73 | MC |
| SRR7265412 | coleoptile | 4dA | 1.63 | MC |
| SRR7265413 | coleoptile | 4dA | 2.35 | MC |
| SRR7265414 | coleoptile | 4dA | 2.63 | MC |
| SRR7265415 | coleoptile | 4dN | 3.21 | MC |
| SRR7265416 | coleoptile | 4dN | 3.52 | MC |
| SRR7265417 | coleoptile | 4dN | 2.77 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.24 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.35 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.96 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.87 | MC |
| SRR7265374 | embryo | dry seed 0 h | 3.15 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.30 | MC |
| SRR7265376 | embryo | 1hA | 1.16 | MC |
| SRR7265377 | embryo | 1hA | 1.43 | MC |
| SRR7265378 | embryo | 1hA | 1.43 | MC |
| SRR7265379 | embryo | 1hN | 2.18 | MC |
| SRR7265380 | embryo | 1hN | 1.51 | MC |
| SRR7265381 | embryo | 1hN | 1.93 | MC |
| SRR7265382 | embryo | 3hA | 1.18 | MC |
| SRR7265383 | embryo | 3hA | 1.18 | MC |
| SRR7265384 | embryo | 3hA | 0.82 | MC |
| SRR7265385 | embryo | 3hN | 1.35 | MC |
| SRR7265386 | embryo | 3hN | 1.38 | MC |
| SRR7265387 | embryo | 3hN | 1.11 | MC |
| SRR7265388 | embryo | 12hA | 3.55 | MC |
| SRR7265389 | embryo | 12hA | 3.13 | MC |
| SRR7265390 | embryo | 12hA | 3.11 | MC |
| SRR7265391 | embryo | 12hN | 2.74 | MC |
| SRR7265392 | embryo | 12hN | 2.80 | MC |
| SRR7265393 | embryo | 12hN | 2.82 | MC |
| SRR7265394 | embryo | 24hA | 3.32 | MC |
| SRR7265395 | embryo | 24hA | 3.47 | MC |
| SRR7265396 | embryo | 24hA | 2.99 | MC |
| SRR7265397 | embryo | 24hN | 3.67 | MC |
| SRR7265398 | embryo | 24hN | 2.85 | MC |
| SRR7265399 | embryo | 24hN | 3.29 | MC |
| SRR2338866 | endosprem | control | 3.64 | MC |
| SRR976168 | flag_leaf | wild_type | 0.51 | MC |
| SRR4457240 | flag_leaf | DAH28 | 3.77 | MC |
| SRR4457241 | flag_leaf | DAH28 | 3.64 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.71 | MC |
| SRR4457248 | flag_leaf | DAH44 | 4.86 | MC |
| SRR8060835 | leaf | wild_type | 2.27 | MC |
| SRR8060837 | leaf | wild_type | 2.21 | MC |
| SRR8240824 | leaf | wild_type | 1.26 | MC |
| SRR8240825 | leaf | wild_type | 1.60 | MC |
| SRR8240826 | leaf | wild_type | 0.62 | MC |
| SRR8240818 | leaf | wild_type | 1.21 | MC |
| SRR8240819 | leaf | wild_type | 0.87 | MC |
| SRR8240820 | leaf | wild_type | 0.69 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.41 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.52 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.87 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.50 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.91 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.92 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.39 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 5.99 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 4.29 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.18 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.89 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 4.36 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 4.46 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.10 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 3.83 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 3.33 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.58 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.10 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 3.83 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 3.33 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.58 | MC |
| SRR1761528 | leaf | drought | 4.10 | MC |
| SRR1761529 | leaf | drought | 3.83 | MC |
| SRR1761530 | leaf | control | 3.33 | MC |
| SRR1761531 | leaf | control | 3.58 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.08 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.66 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.52 | MC |
| SRR6417967 | leaf | H2O_control | 2.17 | MC |
| SRR6417968 | leaf | H2O_control | 2.40 | MC |
| SRR6417969 | leaf | H2O_control | 1.71 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.43 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.57 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 4.14 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 2.32 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.00 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 3.65 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.70 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.92 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.14 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.69 | MC |
| SRR8611902 | leaf | Non-inoculated | 3.38 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.36 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.69 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 3.51 | MC |
| SRR1213692 | leaf | wt | 3.17 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 3.62 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 3.15 | MC |
| SRR6502088 | leaf | control | 3.16 | MC |
| SRR6502089 | leaf | control | 3.11 | MC |
| SRR6502090 | leaf | control | 2.28 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 3.53 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.77 | MC |
| SRR6502100 | leaf | control | 2.59 | MC |
| SRR6502101 | leaf | control | 2.49 | MC |
| SRR6502102 | leaf | control | 2.51 | MC |
| SRR5856927 | leaf | control | 1.46 | MC |
| SRR5856928 | leaf | control | 1.94 | MC |
| SRR5856929 | leaf | control | 1.61 | MC |
| SRR5856930 | leaf | salt | 1.08 | MC |
| SRR5856931 | leaf | salt | 1.43 | MC |
| SRR5856932 | leaf | salt | 0.93 | MC |
| SRR5856933 | leaf | control | 2.50 | MC |
| SRR5856934 | leaf | control | 1.76 | MC |
| SRR5856935 | leaf | control | 2.42 | MC |
| SRR5856936 | leaf | salt | 1.56 | MC |
| SRR5856937 | leaf | salt | 1.55 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.79 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.49 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 1.97 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.44 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.66 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.34 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.69 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.96 | MC |
| SRR6168973 | leaf | none (control) | 3.11 | MC |
| SRR6168974 | leaf | none (control) | 2.79 | MC |
| SRR6168975 | leaf | none (control) | 1.46 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 4.51 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.42 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.41 | MC |
| SRR6168979 | leaf | none (control) | 0.30 | MC |
| SRR6168980 | leaf | none (control) | 0.34 | MC |
| SRR6168981 | leaf | none (control) | 1.49 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.11 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.46 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.92 | MC |
| SRR8582888 | panicle | AM | 2.12 | MC |
| SRR8582889 | panicle | AM | 1.06 | MC |
| SRR8582890 | panicle | AM | 2.13 | MC |
| SRR8582891 | panicle | PM | 4.33 | MC |
| SRR8582892 | panicle | PM | 7.24 | MC |
| SRR5110430 | panicle | Dawn | 5.16 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 4.60 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 4.67 | MC |
| SRR5110437 | panicle | Dawn + 7h | 3.59 | MC |
| SRR5110439 | panicle | Dawn + 7h | 4.53 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 4.34 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.56 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 3.65 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.15 | MC |
| SRR1633182 | panicle | WT | 4.98 | MC |
| SRR1633185 | panicle | WT | 5.47 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.50 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.68 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 3.02 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 3.56 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.27 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.89 | MC |
| SRR1213694 | root | wt | 2.79 | MC |
| SRR4947479 | root | control | 4.46 | MC |
| SRR4947494 | root | control | 4.59 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.41 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.36 | MC |
| SRR1740431 | root_elongation_zone | wt | 2.84 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.73 | MC |
| SRR1740429 | root_meristematic_zone | wt | 3.20 | MC |
| SRR6441554 | seedling | wild_type | 2.70 | MC |
| SRR6441555 | seedling | wild_type | 2.37 | MC |
| SRR2154085 | seedling | wt | 3.75 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.41 | MC |
| SRR1944583 | seedling | no_treatment | 3.08 | MC |
| SRR358791 | seedling | wt | 3.70 | MC |
| SRR358792 | seedling | wt | 3.29 | MC |
| SRR358793 | seedling | wt | 2.75 | MC |
| SRR358794 | seedling | wt | 2.34 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.67 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.10 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.64 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.72 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.87 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.82 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.07 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.73 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.27 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.47 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.37 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.57 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.99 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.51 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.11 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.32 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.19 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.51 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.80 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.28 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.73 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.70 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.30 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.31 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.19 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.84 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.48 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.50 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.51 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.29 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.86 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.17 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.99 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.83 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 6.57 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 7.36 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 7.98 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 7.55 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 9.60 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 7.60 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 7.30 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 8.01 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 6.62 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 7.68 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 7.22 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 7.98 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 9.67 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 4.20 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 3.50 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.49 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 5.95 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.90 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 2.62 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.38 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 4.14 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.46 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.01 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.56 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 3.52 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 3.51 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 3.52 | MC |