| SRR4457252 | 2nd_leaf | DAH12 | 1.24 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.57 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.41 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.48 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.62 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.49 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.15 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.42 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.47 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.26 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.50 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.30 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.49 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.47 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.40 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.72 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.52 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.35 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.85 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.52 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.57 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.72 | MC |
| SRR1213691 | flower | wt | 0.62 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.54 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.70 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.56 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.91 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.25 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.79 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.41 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.33 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.75 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.98 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.90 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.70 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.09 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.64 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.04 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.56 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.32 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.01 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.47 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.20 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.58 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.96 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.18 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.66 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.76 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.05 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.77 | MC |
| SRR1761529 | leaf | drought | 0.60 | MC |
| SRR1761530 | leaf | control | 0.57 | MC |
| SRR1761531 | leaf | control | 0.55 | MC |
| SRR504365 | leaf | wt | 0.70 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.68 | MC |
| SRR6417967 | leaf | H2O_control | 0.74 | MC |
| SRR6417968 | leaf | H2O_control | 1.44 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.29 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.28 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.49 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.28 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.22 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.30 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.21 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.23 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.33 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.29 | MC |
| SRR1213692 | leaf | wt | 1.29 | MC |
| SRR1213693 | leaf | wt | 0.41 | MC |
| SRR5856938 | leaf | salt | 0.24 | MC |
| SRR8582888 | panicle | AM | 0.56 | MC |
| SRR8582889 | panicle | AM | 0.23 | MC |
| SRR8582890 | panicle | AM | 0.44 | MC |
| SRR8582891 | panicle | PM | 0.67 | MC |
| SRR8582892 | panicle | PM | 2.29 | MC |
| SRR8582893 | panicle | PM | 2.49 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.19 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.43 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.64 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.61 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.47 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.74 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.06 | MC |
| SRR5126147 | root | "mock,1_day" | 0.36 | MC |
| SRR5126149 | root | "mock,1_day" | 0.73 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.55 | MC |
| SRR5126165 | root | "mock,14_days" | 0.42 | MC |
| SRR5126169 | root | "mock,14_days" | 0.30 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.36 | MC |
| SRR1213695 | root | wt | 0.91 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.24 | MC |
| SRR6441554 | seedling | wild_type | 0.84 | MC |
| SRR2154086 | seedling | wt | 0.60 | MC |
| SRR2154087 | seedling | wt | 0.47 | MC |
| SRR3098743 | seedling | wt | 0.20 | MC |
| SRR1944583 | seedling | no_treatment | 0.41 | MC |
| SRR358791 | seedling | wt | 0.58 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.79 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.44 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.01 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.76 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.90 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.53 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.34 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.85 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.94 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.28 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.28 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.55 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.68 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.41 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.80 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.99 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.69 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.00 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.07 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.35 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.75 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.17 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.61 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.54 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.52 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.21 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.76 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.73 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.51 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.32 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.86 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.11 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.56 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.04 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.64 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.34 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.35 | MC |