| SRR4457249 | 2nd_leaf | DAH4 | 0.80 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.42 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.47 | MC |
| SRR5560727 | caryopsis | wild_type | 0.30 | MC |
| SRR5560728 | caryopsis | wild_type | 0.37 | MC |
| SRR5560729 | caryopsis | wild_type | 0.53 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.38 | MC |
| SRR7265402 | coleoptile | 2dA | 0.35 | MC |
| SRR7265403 | coleoptile | 2dN | 0.41 | MC |
| SRR7265411 | coleoptile | 3dN | 0.43 | MC |
| SRR7265399 | embryo | 24hN | 0.45 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.52 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.31 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.22 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.36 | MC |
| SRR1213691 | flower | wt | 0.36 | MC |
| SRR8060835 | leaf | wild_type | 2.71 | MC |
| SRR8060836 | leaf | wild_type | 3.10 | MC |
| SRR8060837 | leaf | wild_type | 1.74 | MC |
| SRR8240825 | leaf | wild_type | 0.26 | MC |
| SRR8240818 | leaf | wild_type | 0.25 | MC |
| SRR8240819 | leaf | wild_type | 0.65 | MC |
| SRR8240820 | leaf | wild_type | 0.29 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.74 | MC |
| SRR504365 | leaf | wt | 1.26 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.21 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.21 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.38 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.38 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.44 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.66 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.54 | MC |
| SRR1213692 | leaf | wt | 2.38 | MC |
| SRR1213693 | leaf | wt | 0.79 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.50 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.64 | MC |
| SRR6502090 | leaf | control | 0.53 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.83 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.60 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.18 | MC |
| SRR6502100 | leaf | control | 0.42 | MC |
| SRR6502101 | leaf | control | 0.63 | MC |
| SRR6502102 | leaf | control | 0.45 | MC |
| SRR5856935 | leaf | control | 0.21 | MC |
| SRR5856938 | leaf | salt | 0.18 | MC |
| SRR6168975 | leaf | none (control) | 0.51 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.65 | MC |
| SRR8582889 | panicle | AM | 0.12 | MC |
| SRR8582891 | panicle | PM | 1.06 | MC |
| SRR8582892 | panicle | PM | 1.23 | MC |
| SRR8582893 | panicle | PM | 1.36 | MC |
| SRR5110430 | panicle | Dawn | 0.58 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.49 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.56 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.79 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.56 | MC |
| SRR5110447 | panicle | Dusk | 0.71 | MC |
| SRR5110448 | panicle | Dusk | 0.47 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.68 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.25 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.61 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.79 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.48 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.33 | MC |
| SRR1633182 | panicle | WT | 0.81 | MC |
| SRR1633185 | panicle | WT | 0.94 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.03 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.12 | MC |
| SRR1213695 | root | wt | 0.64 | MC |
| SRR4947506 | root | Al | 0.49 | MC |
| SRR6441554 | seedling | wild_type | 0.47 | MC |
| SRR6441555 | seedling | wild_type | 0.46 | MC |
| SRR2154086 | seedling | wt | 0.45 | MC |
| SRR2154082 | seedling | wt | 0.51 | MC |
| SRR2154084 | seedling | wt | 0.84 | MC |
| SRR2154087 | seedling | wt | 0.36 | MC |
| SRR3098741 | seedling | wt | 0.37 | MC |
| SRR3098742 | seedling | wt | 0.17 | MC |
| SRR3098743 | seedling | wt | 0.45 | MC |
| SRR358794 | seedling | wt | 1.51 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.98 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.58 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.86 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.48 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.21 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.49 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.61 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.68 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.33 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.62 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.95 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.36 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.32 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.72 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.53 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.71 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.53 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.47 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.75 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.30 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.31 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.38 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.03 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.70 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.70 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.91 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.82 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.67 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.09 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.32 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.34 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.75 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.24 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.31 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.62 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.60 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.59 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.92 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.32 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 0.78 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 0.96 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.13 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 2.07 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.66 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.51 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.31 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.25 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.19 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.43 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.38 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.20 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.32 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.52 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.25 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.23 | MC |