| SRR4457251 | 2nd_leaf | DAH4 | 0.43 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.38 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.35 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.25 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.46 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.94 | MC |
| SRR5560728 | caryopsis | wild_type | 0.26 | MC |
| SRR5560729 | caryopsis | wild_type | 0.62 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.23 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.51 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.83 | MC |
| SRR2338869 | endosprem | high_temperature | 0.58 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.39 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.36 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.21 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.40 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.54 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.37 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.37 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.54 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.94 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.35 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.41 | MC |
| SRR1213691 | flower | wt | 1.06 | MC |
| SRR8060835 | leaf | wild_type | 1.29 | MC |
| SRR8060836 | leaf | wild_type | 0.36 | MC |
| SRR8060837 | leaf | wild_type | 2.21 | MC |
| SRR8240818 | leaf | wild_type | 0.31 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.95 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.66 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.44 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.37 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.65 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.32 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.37 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.28 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.33 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.74 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.73 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.44 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.63 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.47 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.35 | MC |
| SRR504365 | leaf | wt | 0.51 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.65 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.06 | MC |
| SRR8611901 | leaf | Non-inoculated | 3.03 | MC |
| SRR8611902 | leaf | Non-inoculated | 3.15 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.66 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.31 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.38 | MC |
| SRR1213692 | leaf | wt | 0.61 | MC |
| SRR1213693 | leaf | wt | 0.81 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.65 | MC |
| SRR6502088 | leaf | control | 0.38 | MC |
| SRR6502101 | leaf | control | 0.98 | MC |
| SRR6168973 | leaf | none (control) | 0.46 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.40 | MC |
| SRR8582893 | panicle | PM | 0.39 | MC |
| SRR4947496 | root | control | 1.87 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.24 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.56 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.51 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.90 | MC |
| SRR5126149 | root | "mock,1_day" | 0.44 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.41 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.34 | MC |
| SRR5126153 | root | "mock,7_days" | 0.33 | MC |
| SRR5126155 | root | "mock,7_days" | 0.29 | MC |
| SRR5126169 | root | "mock,14_days" | 0.29 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.33 | MC |
| SRR1213694 | root | wt | 0.24 | MC |
| SRR1213695 | root | wt | 0.38 | MC |
| SRR4947480 | root | control | 1.34 | MC |
| SRR4947481 | root | control | 2.34 | MC |
| SRR4947484 | root | Al | 0.83 | MC |
| SRR4947488 | root | control | 1.15 | MC |
| SRR4947489 | root | control | 1.32 | MC |
| SRR4947493 | root | Al | 1.51 | MC |
| SRR4947501 | root | Al | 0.75 | MC |
| SRR4947504 | root | control | 1.38 | MC |
| SRR4947505 | root | control | 2.44 | MC |
| SRR4947508 | root | Al | 0.63 | MC |
| SRR4947509 | root | Al | 0.85 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.29 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.32 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.17 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.83 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.21 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.49 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.31 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.39 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.44 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.39 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.13 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 6.27 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.65 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.84 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 4.32 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 3.97 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.79 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 4.81 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.56 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 2.90 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.18 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.61 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.53 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.58 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.56 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.23 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.02 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.59 | MC |