| SRR4457254 | 2nd_leaf | DAH12 | 0.41 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.63 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.43 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.38 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.60 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.35 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.60 | MC |
| SRR5560727 | caryopsis | wild_type | 0.25 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.56 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.47 | MC |
| SRR7265376 | embryo | 1hA | 0.46 | MC |
| SRR7265377 | embryo | 1hA | 0.86 | MC |
| SRR7265378 | embryo | 1hA | 0.76 | MC |
| SRR7265379 | embryo | 1hN | 0.33 | MC |
| SRR7265380 | embryo | 1hN | 0.36 | MC |
| SRR7265381 | embryo | 1hN | 0.30 | MC |
| SRR7265382 | embryo | 3hA | 0.50 | MC |
| SRR7265383 | embryo | 3hA | 0.66 | MC |
| SRR7265384 | embryo | 3hA | 0.37 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.26 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.43 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.43 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.49 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.67 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.36 | MC |
| SRR8060835 | leaf | wild_type | 1.58 | MC |
| SRR8060836 | leaf | wild_type | 0.29 | MC |
| SRR8060837 | leaf | wild_type | 0.44 | MC |
| SRR8240826 | leaf | wild_type | 0.30 | MC |
| SRR8240820 | leaf | wild_type | 0.31 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.66 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.60 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.61 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.48 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.91 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.32 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.98 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.64 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.13 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.94 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.39 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.39 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.58 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.43 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.50 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.64 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.72 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.62 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.54 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.75 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.09 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.96 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.13 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.82 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.66 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.19 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.65 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.54 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.55 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.42 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.69 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.56 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.82 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.41 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.70 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.66 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.61 | MC |
| SRR1761528 | leaf | drought | 0.56 | MC |
| SRR1761529 | leaf | drought | 1.16 | MC |
| SRR1761530 | leaf | control | 0.56 | MC |
| SRR504365 | leaf | wt | 0.31 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.49 | MC |
| SRR6417969 | leaf | H2O_control | 0.42 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.33 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.36 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.55 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.42 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.54 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.21 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.54 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.49 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.57 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.22 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.20 | MC |
| SRR1213692 | leaf | wt | 0.89 | MC |
| SRR1213693 | leaf | wt | 0.53 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.46 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.36 | MC |
| SRR6168973 | leaf | none (control) | 0.59 | MC |
| SRR6168974 | leaf | none (control) | 1.13 | MC |
| SRR6168975 | leaf | none (control) | 1.47 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.85 | MC |
| SRR6168979 | leaf | none (control) | 1.26 | MC |
| SRR6168980 | leaf | none (control) | 0.62 | MC |
| SRR6168981 | leaf | none (control) | 1.15 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.33 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.41 | MC |
| SRR8582888 | panicle | AM | 2.17 | MC |
| SRR8582889 | panicle | AM | 0.29 | MC |
| SRR8582890 | panicle | AM | 0.45 | MC |
| SRR8582891 | panicle | PM | 0.78 | MC |
| SRR8582892 | panicle | PM | 1.74 | MC |
| SRR1633182 | panicle | WT | 0.64 | MC |
| SRR1633185 | panicle | WT | 0.84 | MC |
| SRR1213695 | root | wt | 0.97 | MC |
| SRR4947501 | root | Al | 0.61 | MC |
| SRR6441555 | seedling | wild_type | 0.41 | MC |
| SRR3098741 | seedling | wt | 0.43 | MC |
| SRR3098742 | seedling | wt | 0.35 | MC |
| SRR3098743 | seedling | wt | 0.17 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.31 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.06 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.03 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.70 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.62 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.17 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.87 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.28 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.15 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.16 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.31 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.34 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.52 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.54 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.85 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.69 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.67 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.43 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.33 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.86 | MC |