| SRR4457250 | 2nd_leaf | DAH4 | 0.71 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.24 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.43 | MC |
| SRR5560727 | caryopsis | wild_type | 1.05 | MC |
| SRR5560728 | caryopsis | wild_type | 0.99 | MC |
| SRR5560729 | caryopsis | wild_type | 0.71 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.75 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.74 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.66 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.26 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.47 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.86 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.73 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.37 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.24 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.52 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.32 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.52 | MC |
| SRR8060835 | leaf | wild_type | 0.53 | MC |
| SRR8060836 | leaf | wild_type | 0.24 | MC |
| SRR8060837 | leaf | wild_type | 0.77 | MC |
| SRR8240824 | leaf | wild_type | 0.31 | MC |
| SRR8240819 | leaf | wild_type | 0.31 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.54 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.57 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.81 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.63 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.60 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.54 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.72 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.54 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.56 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.71 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.42 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.67 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.61 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.90 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.79 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.55 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.66 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.12 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.60 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.62 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.22 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.50 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.42 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.50 | MC |
| SRR1761531 | leaf | control | 0.50 | MC |
| SRR504365 | leaf | wt | 0.52 | MC |
| SRR6417969 | leaf | H2O_control | 0.56 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.45 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.41 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.72 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.57 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.54 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.35 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.71 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.95 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.31 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.79 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.42 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.40 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.39 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.48 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 1.56 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 0.96 | MC |
| SRR6168979 | leaf | none (control) | 0.53 | MC |
| SRR6168980 | leaf | none (control) | 0.67 | MC |
| SRR6168981 | leaf | none (control) | 2.31 | MC |
| SRR8582889 | panicle | AM | 1.44 | MC |
| SRR8582890 | panicle | AM | 0.54 | MC |
| SRR8582891 | panicle | PM | 2.38 | MC |
| SRR8582893 | panicle | PM | 2.62 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.52 | MC |
| SRR5110445 | panicle | Dusk | 0.56 | MC |
| SRR5110447 | panicle | Dusk | 0.59 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.94 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.43 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.45 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.61 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.42 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.48 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.79 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.74 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.60 | MC |
| SRR6441554 | seedling | wild_type | 2.27 | MC |
| SRR6441555 | seedling | wild_type | 1.94 | MC |
| SRR2154086 | seedling | wt | 0.42 | MC |
| SRR3098741 | seedling | wt | 2.36 | MC |
| SRR3098742 | seedling | wt | 1.31 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.16 | MC |
| SRR1944583 | seedling | no_treatment | 1.68 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.34 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.35 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.50 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.79 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.82 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.87 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.47 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.31 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.40 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.82 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.09 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.42 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.15 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.90 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.50 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.41 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.43 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.47 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.58 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.36 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.36 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.06 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.52 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.25 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.84 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.42 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.28 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.53 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.35 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.30 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.69 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.26 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.50 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.84 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.80 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.86 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.68 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.86 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.06 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.00 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.56 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.81 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.69 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.40 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.08 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.72 | MC |