| SRR4457250 | 2nd_leaf | DAH4 | 3.00 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 3.00 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 3.34 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 3.73 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.85 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.65 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.71 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 3.04 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.92 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.66 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.98 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 5.59 | MC |
| SRR3745125 | anther | wt | 2.45 | MC |
| SRR3745126 | anther | wt | 2.89 | MC |
| SRR3745127 | anther | wt | 2.80 | MC |
| SRR6320473 | carpel | wt | 4.93 | MC |
| SRR5560727 | caryopsis | wild_type | 2.89 | MC |
| SRR5560729 | caryopsis | wild_type | 2.60 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 2.89 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.50 | MC |
| SRR7265414 | coleoptile | 4dA | 2.21 | MC |
| SRR7265417 | coleoptile | 4dN | 2.96 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.14 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.87 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.59 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.52 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.89 | MC |
| SRR7265373 | embryo | dry seed 0 h | 3.40 | MC |
| SRR7265382 | embryo | 3hA | 4.19 | MC |
| SRR7265383 | embryo | 3hA | 2.57 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.94 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.97 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.55 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.73 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.79 | MC |
| SRR4457236 | flag_leaf | DAH12 | 3.30 | MC |
| SRR4457238 | flag_leaf | DAH20 | 3.01 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.32 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.00 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.86 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.55 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.66 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.84 | MC |
| SRR1213691 | flower | wt | 1.08 | MC |
| SRR8060835 | leaf | wild_type | 0.75 | MC |
| SRR8060836 | leaf | wild_type | 0.75 | MC |
| SRR8060837 | leaf | wild_type | 0.22 | MC |
| SRR8240826 | leaf | wild_type | 1.34 | MC |
| SRR8240819 | leaf | wild_type | 2.16 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.63 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.50 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.28 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.76 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.37 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.12 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.90 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.40 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.83 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.13 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.30 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.18 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.86 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.64 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.24 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.37 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.43 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.00 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.86 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.56 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.52 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.23 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.59 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.59 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.41 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.13 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.22 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.52 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.97 | MC |
| SRR504365 | leaf | wt | 1.68 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.77 | MC |
| SRR6417967 | leaf | H2O_control | 1.20 | MC |
| SRR6417969 | leaf | H2O_control | 2.93 | MC |
| SRR8611900 | leaf | Non-inoculated | 3.04 | MC |
| SRR8611901 | leaf | Non-inoculated | 3.31 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.66 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.69 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.27 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.36 | MC |
| SRR1213693 | leaf | wt | 0.71 | MC |
| SRR5856927 | leaf | control | 0.47 | MC |
| SRR5856935 | leaf | control | 0.73 | MC |
| SRR5856936 | leaf | salt | 0.46 | MC |
| SRR5856937 | leaf | salt | 0.26 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 7.73 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 6.14 | MC |
| SRR6168979 | leaf | none (control) | 1.91 | MC |
| SRR6168980 | leaf | none (control) | 0.47 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.87 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.22 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.52 | MC |
| SRR8582891 | panicle | PM | 0.81 | MC |
| SRR8582892 | panicle | PM | 0.73 | MC |
| SRR8582893 | panicle | PM | 1.33 | MC |
| SRR5110432 | panicle | Dawn | 0.63 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.52 | MC |
| SRR5110446 | panicle | Dusk | 2.00 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.65 | MC |
| SRR1633182 | panicle | WT | 4.90 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.68 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.58 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.19 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.96 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.82 | MC |
| SRR5126148 | root | "mock,1_day" | 1.00 | MC |
| SRR5126153 | root | "mock,7_days" | 1.59 | MC |
| SRR5126155 | root | "mock,7_days" | 4.02 | MC |
| SRR5126157 | root | "mock,7_days" | 0.98 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.07 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.69 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.91 | MC |
| SRR5126167 | root | "mock,14_days" | 3.30 | MC |
| SRR5126169 | root | "mock,14_days" | 4.56 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.15 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.14 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.02 | MC |
| SRR1213694 | root | wt | 3.10 | MC |
| SRR4947483 | root | Al | 0.56 | MC |
| SRR4947505 | root | control | 1.91 | MC |
| SRR4947507 | root | Al | 0.89 | MC |
| SRR4947508 | root | Al | 0.95 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.55 | MC |
| SRR6502107 | root | control | 3.06 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.97 | MC |
| SRR1740432 | root_elongation_zone | wt | 3.31 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.32 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.81 | MC |
| SRR6441554 | seedling | wild_type | 1.13 | MC |
| SRR2154086 | seedling | wt | 1.66 | MC |
| SRR2154082 | seedling | wt | 2.99 | MC |
| SRR2154085 | seedling | wt | 1.72 | MC |
| SRR2154087 | seedling | wt | 1.55 | MC |
| SRR3098742 | seedling | wt | 2.82 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.58 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.68 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.43 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.93 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.89 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.99 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.80 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.48 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.24 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.88 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.17 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.35 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.80 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.20 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.78 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.76 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.11 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.73 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 4.12 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 4.50 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.73 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.37 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.55 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.12 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.69 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.64 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.01 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.45 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.76 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.42 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.97 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.64 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 3.31 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 4.55 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 8.54 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 5.03 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.72 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 3.78 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 3.11 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 4.21 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.21 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.59 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.37 | MC |