| SRR4457250 | 2nd_leaf | DAH4 | 0.66 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.42 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.84 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.03 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.81 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.87 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.72 | MC |
| SRR5560729 | caryopsis | wild_type | 0.58 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.07 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.64 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.86 | MC |
| SRR7265401 | coleoptile | 2dA | 0.38 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.72 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.58 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.78 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.47 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.42 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.34 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.68 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.30 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.23 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.49 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.66 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.44 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.60 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.17 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.47 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.81 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.05 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.16 | MC |
| SRR8060835 | leaf | wild_type | 0.53 | MC |
| SRR8060837 | leaf | wild_type | 0.60 | MC |
| SRR8240824 | leaf | wild_type | 1.26 | MC |
| SRR8240825 | leaf | wild_type | 1.17 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.04 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.49 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.39 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.50 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.43 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.31 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.61 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.17 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.75 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.19 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.75 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.20 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.75 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.20 | MC |
| SRR1761528 | leaf | drought | 0.75 | MC |
| SRR1761531 | leaf | control | 1.20 | MC |
| SRR504365 | leaf | wt | 0.35 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.99 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.58 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.44 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.05 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.63 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.46 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.56 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.13 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.03 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.81 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.50 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.45 | MC |
| SRR1213692 | leaf | wt | 0.46 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.66 | MC |
| SRR6502089 | leaf | control | 0.74 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.17 | MC |
| SRR6502102 | leaf | control | 1.01 | MC |
| SRR5856934 | leaf | control | 0.55 | MC |
| SRR6168973 | leaf | none (control) | 0.42 | MC |
| SRR6168974 | leaf | none (control) | 0.60 | MC |
| SRR6168975 | leaf | none (control) | 0.54 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.52 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.26 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.55 | MC |
| SRR8582890 | panicle | AM | 0.23 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.39 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.51 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.50 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.35 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.01 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.59 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.67 | MC |
| SRR5126147 | root | "mock,1_day" | 0.45 | MC |
| SRR5126149 | root | "mock,1_day" | 0.43 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.47 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.37 | MC |
| SRR5126153 | root | "mock,7_days" | 0.53 | MC |
| SRR5126155 | root | "mock,7_days" | 0.76 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.44 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.98 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.32 | MC |
| SRR5126165 | root | "mock,14_days" | 0.61 | MC |
| SRR5126167 | root | "mock,14_days" | 0.69 | MC |
| SRR5126169 | root | "mock,14_days" | 0.76 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.35 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.31 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.92 | MC |
| SRR6502094 | root | control | 1.23 | MC |
| SRR6502095 | root | control | 1.27 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.88 | MC |
| SRR6502107 | root | control | 1.15 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.64 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.88 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.46 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.01 | MC |
| SRR6441554 | seedling | wild_type | 0.33 | MC |
| SRR6441555 | seedling | wild_type | 1.30 | MC |
| SRR3098741 | seedling | wt | 0.80 | MC |
| SRR3098742 | seedling | wt | 0.78 | MC |
| SRR3098743 | seedling | wt | 0.74 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.96 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.60 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.14 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.49 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.94 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.88 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.18 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.32 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.33 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.06 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.55 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.42 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.78 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.82 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.68 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.53 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.85 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.00 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.92 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.74 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.30 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.00 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.86 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.99 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.63 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.05 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.54 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.80 | MC |