| SRR4457249 | 2nd_leaf | DAH4 | 4.73 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 4.45 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 2.97 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.73 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.32 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 4.74 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 4.03 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 3.03 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 2.32 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 2.32 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.13 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 5.41 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 2.44 | MC |
| SRR7265413 | coleoptile | 4dA | 1.45 | MC |
| SRR7265414 | coleoptile | 4dA | 0.69 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.36 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.47 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.02 | MC |
| SRR4457232 | flag_leaf | DAH4 | 2.90 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.89 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.48 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.48 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.56 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.12 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.70 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.18 | MC |
| SRR4457240 | flag_leaf | DAH28 | 3.12 | MC |
| SRR4457241 | flag_leaf | DAH28 | 3.21 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.63 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.99 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.80 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.44 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.50 | MC |
| SRR8060835 | leaf | wild_type | 0.52 | MC |
| SRR8060836 | leaf | wild_type | 1.56 | MC |
| SRR8060837 | leaf | wild_type | 0.65 | MC |
| SRR8240824 | leaf | wild_type | 0.31 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.39 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.18 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.28 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.73 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.17 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.50 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.34 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.51 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.50 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.34 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.51 | MC |
| SRR1761528 | leaf | drought | 0.50 | MC |
| SRR1761530 | leaf | control | 1.34 | MC |
| SRR1761531 | leaf | control | 0.51 | MC |
| SRR504365 | leaf | wt | 2.46 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.08 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.80 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.33 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.25 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.30 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.33 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.41 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.45 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.10 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.03 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.40 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.11 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.54 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.00 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.90 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.25 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.38 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.30 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.51 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.83 | MC |
| SRR1213692 | leaf | wt | 1.04 | MC |
| SRR1213693 | leaf | wt | 0.77 | MC |
| SRR6502088 | leaf | control | 0.46 | MC |
| SRR6502090 | leaf | control | 0.32 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.37 | MC |
| SRR5856927 | leaf | control | 1.46 | MC |
| SRR5856928 | leaf | control | 0.77 | MC |
| SRR5856929 | leaf | control | 0.93 | MC |
| SRR5856931 | leaf | salt | 0.25 | MC |
| SRR5856933 | leaf | control | 0.82 | MC |
| SRR5856934 | leaf | control | 0.63 | MC |
| SRR5856935 | leaf | control | 0.40 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.22 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.93 | MC |
| SRR4947496 | root | control | 0.70 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.26 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.59 | MC |
| SRR1633182 | panicle | WT | 1.64 | MC |
| SRR1633185 | panicle | WT | 2.74 | MC |
| SRR5126153 | root | "mock,7_days" | 0.52 | MC |
| SRR5126155 | root | "mock,7_days" | 0.66 | MC |
| SRR5126157 | root | "mock,7_days" | 0.72 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.86 | MC |
| SRR5126165 | root | "mock,14_days" | 0.47 | MC |
| SRR5126169 | root | "mock,14_days" | 0.32 | MC |
| SRR1213694 | root | wt | 0.53 | MC |
| SRR1213695 | root | wt | 0.67 | MC |
| SRR4947480 | root | control | 0.52 | MC |
| SRR4947481 | root | control | 0.54 | MC |
| SRR4947484 | root | Al | 0.79 | MC |
| SRR4947489 | root | control | 0.50 | MC |
| SRR4947492 | root | Al | 1.06 | MC |
| SRR4947493 | root | Al | 0.55 | MC |
| SRR4947497 | root | control | 0.93 | MC |
| SRR4947500 | root | Al | 0.70 | MC |
| SRR4947501 | root | Al | 0.77 | MC |
| SRR4947504 | root | control | 1.11 | MC |
| SRR4947505 | root | control | 1.07 | MC |
| SRR4947508 | root | Al | 0.80 | MC |
| SRR4947509 | root | Al | 1.07 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.43 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.64 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.89 | MC |
| SRR6502094 | root | control | 0.81 | MC |
| SRR6502095 | root | control | 0.66 | MC |
| SRR6502096 | root | control | 0.48 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.45 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.31 | MC |
| SRR6441554 | seedling | wild_type | 0.50 | MC |
| SRR6441555 | seedling | wild_type | 0.40 | MC |
| SRR2154086 | seedling | wt | 0.72 | MC |
| SRR2154082 | seedling | wt | 0.30 | MC |
| SRR2154083 | seedling | wt | 0.58 | MC |
| SRR2154084 | seedling | wt | 0.48 | MC |
| SRR2154085 | seedling | wt | 0.72 | MC |
| SRR2154087 | seedling | wt | 0.43 | MC |
| SRR3098741 | seedling | wt | 0.50 | MC |
| SRR3098742 | seedling | wt | 0.46 | MC |
| SRR3098743 | seedling | wt | 0.48 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.87 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.47 | MC |
| SRR1944583 | seedling | no_treatment | 0.79 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.77 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.02 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.27 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.41 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.58 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.40 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.36 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.59 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.38 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.10 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.44 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.46 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.89 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.52 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.62 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.56 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 3.00 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 3.15 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.49 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 10.41 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 8.58 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 7.72 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 6.55 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 7.36 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 3.55 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 6.38 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 5.76 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 4.14 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 4.16 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 4.79 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 5.09 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 5.17 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 5.02 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 5.98 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 4.41 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 5.90 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 14.42 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.29 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.70 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.39 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.56 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.65 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 2.88 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 2.29 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.15 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.74 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.29 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.72 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.64 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.40 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.13 | MC |