| SRR4457252 | 2nd_leaf | DAH12 | 0.54 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.40 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.29 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.95 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.91 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.60 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.04 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.56 | MC |
| SRR7265406 | coleoptile | 3dA | 0.30 | MC |
| SRR7265410 | coleoptile | 3dN | 0.49 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.71 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.46 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.40 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.34 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.80 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.23 | MC |
| SRR7265376 | embryo | 1hA | 1.09 | MC |
| SRR7265377 | embryo | 1hA | 0.76 | MC |
| SRR7265378 | embryo | 1hA | 0.64 | MC |
| SRR7265379 | embryo | 1hN | 1.35 | MC |
| SRR7265380 | embryo | 1hN | 0.36 | MC |
| SRR7265381 | embryo | 1hN | 1.99 | MC |
| SRR7265384 | embryo | 3hA | 0.47 | MC |
| SRR7265385 | embryo | 3hN | 0.43 | MC |
| SRR7265386 | embryo | 3hN | 1.79 | MC |
| SRR7265387 | embryo | 3hN | 0.89 | MC |
| SRR7265390 | embryo | 12hA | 0.90 | MC |
| SRR7265392 | embryo | 12hN | 0.45 | MC |
| SRR7265393 | embryo | 12hN | 0.40 | MC |
| SRR7265396 | embryo | 24hA | 1.75 | MC |
| SRR7265398 | embryo | 24hN | 0.47 | MC |
| SRR2338869 | endosprem | high_temperature | 0.50 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.43 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.59 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.98 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.04 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.38 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.40 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.42 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.32 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.28 | MC |
| SRR1213691 | flower | wt | 0.65 | MC |
| SRR8060835 | leaf | wild_type | 1.12 | MC |
| SRR8060836 | leaf | wild_type | 1.77 | MC |
| SRR8060837 | leaf | wild_type | 0.72 | MC |
| SRR8240818 | leaf | wild_type | 0.61 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.54 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.05 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.17 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.51 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.71 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.34 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.91 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.80 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.38 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.24 | MC |
| SRR5856927 | leaf | control | 0.69 | MC |
| SRR5856931 | leaf | salt | 0.18 | MC |
| SRR5856934 | leaf | control | 0.33 | MC |
| SRR5110429 | panicle | Dawn | 0.41 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.40 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.35 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.59 | MC |
| SRR5126148 | root | "mock,1_day" | 0.57 | MC |
| SRR5126149 | root | "mock,1_day" | 1.06 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.81 | MC |
| SRR5126155 | root | "mock,7_days" | 1.10 | MC |
| SRR5126157 | root | "mock,7_days" | 0.67 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.38 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.77 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.67 | MC |
| SRR5126165 | root | "mock,14_days" | 0.60 | MC |
| SRR5126167 | root | "mock,14_days" | 0.33 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.58 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.33 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.39 | MC |
| SRR1213694 | root | wt | 0.26 | MC |
| SRR1213695 | root | wt | 0.19 | MC |
| SRR4947494 | root | control | 0.76 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.80 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.28 | MC |
| SRR3098741 | seedling | wt | 0.31 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.41 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.88 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.70 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.73 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.47 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.84 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.80 | MC |