| SRR4457252 | 2nd_leaf | DAH12 | 0.53 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.25 | MC |
| SRR6320498 | carpel | wt | 3.45 | MC |
| SRR5560728 | caryopsis | wild_type | 0.49 | MC |
| SRR5560729 | caryopsis | wild_type | 0.37 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.55 | MC |
| SRR7265408 | coleoptile | 3dA | 2.60 | MC |
| SRR7265409 | coleoptile | 3dN | 3.30 | MC |
| SRR7265415 | coleoptile | 4dN | 3.49 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.50 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.40 | MC |
| SRR7265395 | embryo | 24hA | 4.90 | MC |
| SRR2338868 | endosprem | high_temperature | 1.12 | MC |
| SRR2338869 | endosprem | high_temperature | 1.36 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.33 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.23 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.44 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.00 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.58 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.38 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.64 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.39 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.31 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.47 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.39 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.68 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.67 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.80 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.80 | MC |
| SRR1761528 | leaf | drought | 0.80 | MC |
| SRR504365 | leaf | wt | 0.20 | MC |
| SRR6417967 | leaf | H2O_control | 0.44 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.54 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.42 | MC |
| SRR1213692 | leaf | wt | 0.30 | MC |
| SRR6168973 | leaf | none (control) | 0.28 | MC |
| SRR5110432 | panicle | Dawn | 0.49 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.46 | MC |
| SRR5110447 | panicle | Dusk | 0.34 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.78 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.16 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.24 | MC |
| SRR1633182 | panicle | WT | 0.91 | MC |
| SRR1633185 | panicle | WT | 1.63 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.46 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.43 | MC |
| SRR5126153 | root | "mock,7_days" | 0.38 | MC |
| SRR5126155 | root | "mock,7_days" | 0.38 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.42 | MC |
| SRR5126167 | root | "mock,14_days" | 0.27 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.36 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.42 | MC |
| SRR1213695 | root | wt | 0.32 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.23 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.29 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.15 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.31 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.39 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.02 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.75 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.02 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.55 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.36 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.80 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.53 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.37 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.28 | MC |