| SRR4457254 | 2nd_leaf | DAH12 | 0.26 | MC |
| SRR358795 | callus | wt | 1.40 | MC |
| SRR358798 | callus | wt | 2.50 | MC |
| SRR6320473 | carpel | wt | 2.22 | MC |
| SRR6320498 | carpel | wt | 2.11 | MC |
| SRR5560727 | caryopsis | wild_type | 0.78 | MC |
| SRR5560728 | caryopsis | wild_type | 2.70 | MC |
| SRR5560729 | caryopsis | wild_type | 0.36 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.44 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.50 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.38 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.95 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.47 | MC |
| SRR7265378 | embryo | 1hA | 0.23 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.64 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.22 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.24 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.35 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.51 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.39 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.33 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.21 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.89 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.20 | MC |
| SRR6168973 | leaf | none (control) | 0.60 | MC |
| SRR6168975 | leaf | none (control) | 0.50 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.82 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.60 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.65 | MC |
| SRR6168979 | leaf | none (control) | 0.40 | MC |
| SRR6168980 | leaf | none (control) | 1.00 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.27 | MC |
| SRR5110432 | panicle | Dawn | 0.44 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.55 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.33 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.30 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.39 | MC |
| SRR1633182 | panicle | WT | 0.86 | MC |
| SRR1633185 | panicle | WT | 1.38 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.20 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.06 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.45 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.76 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.74 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.10 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.44 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.61 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.55 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.80 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.82 | MC |
| SRR5126167 | root | "mock,14_days" | 0.62 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.38 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.61 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.46 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.81 | MC |
| SRR1213694 | root | wt | 0.24 | MC |
| SRR1213695 | root | wt | 0.20 | MC |
| SRR2154086 | seedling | wt | 0.42 | MC |
| SRR2154084 | seedling | wt | 0.31 | MC |
| SRR2154085 | seedling | wt | 0.35 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.09 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.97 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.42 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.03 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.02 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.31 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.32 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.11 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.55 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.69 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.96 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.19 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.28 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.33 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.77 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.28 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.59 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.60 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.64 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 3.35 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 3.23 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 5.64 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 5.35 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.69 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.35 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.91 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.50 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.57 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.24 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.40 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.87 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.90 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.60 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.18 | MC |