| SRR4457249 | 2nd_leaf | DAH4 | 1.12 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.49 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.64 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.26 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.57 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.45 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.32 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.38 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.44 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.82 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.14 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.77 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 2.62 | MC |
| SRR3745126 | anther | wt | 0.53 | MC |
| SRR6320473 | carpel | wt | 1.09 | MC |
| SRR4947495 | root | control | 1.55 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.71 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 3.74 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.63 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.85 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.49 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.06 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.26 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.68 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.23 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.13 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.37 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.27 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.22 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.51 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.59 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.55 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.84 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.55 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.02 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.64 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.29 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.51 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.55 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.43 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.50 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.68 | MC |
| SRR8240818 | leaf | wild_type | 1.84 | MC |
| SRR8240820 | leaf | wild_type | 1.94 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.65 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.01 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.00 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.60 | MC |
| SRR6502088 | leaf | control | 2.15 | MC |
| SRR6502089 | leaf | control | 1.10 | MC |
| SRR6502090 | leaf | control | 1.79 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.52 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.33 | MC |
| SRR6502100 | leaf | control | 1.40 | MC |
| SRR6502101 | leaf | control | 1.47 | MC |
| SRR6502102 | leaf | control | 1.28 | MC |
| SRR5856931 | leaf | salt | 0.15 | MC |
| SRR5856936 | leaf | salt | 0.20 | MC |
| SRR5856938 | leaf | salt | 0.15 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.63 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.90 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.60 | MC |
| SRR6168973 | leaf | none (control) | 0.51 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.29 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.61 | MC |
| SRR5110429 | panicle | Dawn | 2.38 | MC |
| SRR5110430 | panicle | Dawn | 1.94 | MC |
| SRR5110431 | panicle | Dawn | 0.66 | MC |
| SRR5110432 | panicle | Dawn | 2.21 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 2.88 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.31 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.50 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.61 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.76 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.06 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.71 | MC |
| SRR5110440 | panicle | Dawn + 7h | 2.52 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 3.24 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.47 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.49 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 4.48 | MC |
| SRR5110445 | panicle | Dusk | 0.82 | MC |
| SRR5110446 | panicle | Dusk | 2.76 | MC |
| SRR5110447 | panicle | Dusk | 2.40 | MC |
| SRR5110448 | panicle | Dusk | 3.88 | MC |
| SRR5110449 | panicle | Dawn + 14h | 2.22 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.88 | MC |
| SRR5110451 | panicle | Dawn + 14h | 3.53 | MC |
| SRR5110452 | panicle | Dawn + 14h | 3.15 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.67 | MC |
| SRR5110457 | panicle | Dawn + 21h | 3.42 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.25 | MC |
| SRR1633182 | panicle | WT | 1.11 | MC |
| SRR1633185 | panicle | WT | 1.71 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.50 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.48 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.35 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.33 | MC |
| SRR4947482 | root | Al | 0.62 | MC |
| SRR4947483 | root | Al | 1.43 | MC |
| SRR4947487 | root | control | 2.23 | MC |
| SRR4947490 | root | Al | 1.58 | MC |
| SRR4947503 | root | control | 1.45 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.08 | MC |
| SRR6502092 | root | 100 mM NaCl | 1.01 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.32 | MC |
| SRR6502094 | root | control | 1.64 | MC |
| SRR6502095 | root | control | 2.29 | MC |
| SRR6502096 | root | control | 1.41 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.94 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.66 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.95 | MC |
| SRR6502106 | root | control | 1.43 | MC |
| SRR6502107 | root | control | 1.27 | MC |
| SRR6502108 | root | control | 1.32 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.60 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.31 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.57 | MC |
| SRR2154082 | seedling | wt | 0.32 | MC |
| SRR2154084 | seedling | wt | 0.28 | MC |
| SRR3098743 | seedling | wt | 2.16 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.07 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.55 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.99 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.24 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.71 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.14 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.21 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.78 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.21 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.38 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.39 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.16 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.01 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.94 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.71 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.54 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.00 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 2.01 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.84 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.39 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.27 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.86 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.85 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 2.61 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.20 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 2.27 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 3.85 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.81 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.89 | MC |