| SRR4457249 | 2nd_leaf | DAH4 | 3.58 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 3.75 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 3.59 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.78 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.65 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.86 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.94 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.65 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.65 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.64 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.80 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.74 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 3.22 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.64 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 3.82 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 5.45 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.83 | MC |
| SRR3745125 | anther | wt | 3.02 | MC |
| SRR3745126 | anther | wt | 1.65 | MC |
| SRR3745127 | anther | wt | 1.86 | MC |
| SRR358795 | callus | wt | 1.60 | MC |
| SRR358796 | callus | wt | 1.60 | MC |
| SRR358797 | callus | wt | 1.62 | MC |
| SRR358798 | callus | wt | 1.25 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.58 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.33 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.46 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 4.31 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.43 | MC |
| SRR4457232 | flag_leaf | DAH4 | 2.14 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.90 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.10 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.61 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.61 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.83 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.88 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.74 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.50 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.31 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.87 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.01 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.48 | MC |
| SRR4457246 | flag_leaf | DAH44 | 3.74 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.69 | MC |
| SRR4457248 | flag_leaf | DAH44 | 3.01 | MC |
| SRR8240824 | leaf | wild_type | 0.27 | MC |
| SRR8240825 | leaf | wild_type | 0.32 | MC |
| SRR8240826 | leaf | wild_type | 0.35 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.38 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.44 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.18 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.13 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.87 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.15 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.59 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.14 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.35 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.56 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.12 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.80 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.81 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.12 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.44 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.23 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.74 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.54 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.79 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 3.48 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.72 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.10 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.88 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.63 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.35 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.71 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.78 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.28 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.22 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.82 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 4.16 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 3.26 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.56 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.04 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.52 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.17 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.58 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.04 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.53 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.15 | MC |
| SRR1761528 | leaf | drought | 2.64 | MC |
| SRR1761529 | leaf | drought | 2.02 | MC |
| SRR1761530 | leaf | control | 2.50 | MC |
| SRR1761531 | leaf | control | 2.15 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.58 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.05 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.77 | MC |
| SRR6417967 | leaf | H2O_control | 0.79 | MC |
| SRR6417968 | leaf | H2O_control | 0.96 | MC |
| SRR6417969 | leaf | H2O_control | 1.59 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.53 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.75 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.78 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.33 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.57 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.58 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.26 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.63 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.90 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.32 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.69 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.86 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.40 | MC |
| SRR8611901 | leaf | Non-inoculated | 2.86 | MC |
| SRR8611902 | leaf | Non-inoculated | 3.54 | MC |
| SRR1213693 | leaf | wt | 3.86 | MC |
| SRR6502101 | leaf | control | 0.32 | MC |
| SRR8582888 | panicle | AM | 0.41 | MC |
| SRR8582889 | panicle | AM | 0.78 | MC |
| SRR8582890 | panicle | AM | 1.44 | MC |
| SRR8582892 | panicle | PM | 5.48 | MC |
| SRR1633182 | panicle | WT | 2.51 | MC |
| SRR1633185 | panicle | WT | 3.94 | MC |
| SRR5126147 | root | "mock,1_day" | 0.65 | MC |
| SRR5126148 | root | "mock,1_day" | 0.88 | MC |
| SRR5126149 | root | "mock,1_day" | 1.63 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.80 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.79 | MC |
| SRR5126153 | root | "mock,7_days" | 1.45 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.93 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.76 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.92 | MC |
| SRR5126165 | root | "mock,14_days" | 1.38 | MC |
| SRR5126167 | root | "mock,14_days" | 2.30 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.95 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.02 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 3.28 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.93 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.18 | MC |
| SRR6502107 | root | control | 0.31 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.88 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.67 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.76 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.24 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.34 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.48 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.53 | MC |
| SRR358791 | seedling | wt | 4.62 | MC |
| SRR358792 | seedling | wt | 3.43 | MC |
| SRR358793 | seedling | wt | 3.62 | MC |
| SRR358794 | seedling | wt | 5.12 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.32 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.39 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.66 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.06 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.49 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.71 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.67 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.94 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.64 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.79 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.26 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.12 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.60 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.34 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 4.14 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 3.63 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.50 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.12 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.11 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.79 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.23 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.88 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.97 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.66 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.67 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.54 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.39 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.30 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.17 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.66 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.31 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.36 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.97 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.56 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.15 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.23 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.85 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.37 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.21 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.92 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.87 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.11 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.79 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.34 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.44 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.93 | MC |