| SRR4457263 | 2nd_leaf | DAH36 | 3.52 | MC |
| SRR358795 | callus | wt | 2.85 | MC |
| SRR358796 | callus | wt | 3.01 | MC |
| SRR358797 | callus | wt | 2.12 | MC |
| SRR358798 | callus | wt | 3.30 | MC |
| SRR6320473 | carpel | wt | 2.45 | MC |
| SRR6320498 | carpel | wt | 2.20 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.49 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.49 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.88 | MC |
| SRR4947495 | root | control | 1.43 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.23 | MC |
| SRR7265400 | coleoptile | 2dA | 1.07 | MC |
| SRR7265401 | coleoptile | 2dA | 0.97 | MC |
| SRR7265402 | coleoptile | 2dA | 0.79 | MC |
| SRR7265403 | coleoptile | 2dN | 1.46 | MC |
| SRR7265404 | coleoptile | 2dN | 1.05 | MC |
| SRR7265405 | coleoptile | 2dN | 1.26 | MC |
| SRR7265406 | coleoptile | 3dA | 0.47 | MC |
| SRR7265407 | coleoptile | 3dA | 0.67 | MC |
| SRR7265408 | coleoptile | 3dA | 0.37 | MC |
| SRR7265409 | coleoptile | 3dN | 0.84 | MC |
| SRR7265410 | coleoptile | 3dN | 0.53 | MC |
| SRR7265411 | coleoptile | 3dN | 0.60 | MC |
| SRR7265412 | coleoptile | 4dA | 0.60 | MC |
| SRR7265413 | coleoptile | 4dA | 1.64 | MC |
| SRR7265414 | coleoptile | 4dA | 0.93 | MC |
| SRR7265415 | coleoptile | 4dN | 0.73 | MC |
| SRR7265416 | coleoptile | 4dN | 0.47 | MC |
| SRR7265417 | coleoptile | 4dN | 0.71 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.18 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.81 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.06 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 2.04 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.55 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 3.59 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.23 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.65 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.15 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.82 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.81 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.07 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.88 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.13 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.78 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.86 | MC |
| SRR7265376 | embryo | 1hA | 1.68 | MC |
| SRR7265377 | embryo | 1hA | 1.81 | MC |
| SRR7265378 | embryo | 1hA | 1.70 | MC |
| SRR7265379 | embryo | 1hN | 1.90 | MC |
| SRR7265380 | embryo | 1hN | 1.86 | MC |
| SRR7265381 | embryo | 1hN | 2.26 | MC |
| SRR7265382 | embryo | 3hA | 1.88 | MC |
| SRR7265383 | embryo | 3hA | 2.33 | MC |
| SRR7265384 | embryo | 3hA | 2.35 | MC |
| SRR7265385 | embryo | 3hN | 2.09 | MC |
| SRR7265386 | embryo | 3hN | 1.68 | MC |
| SRR7265387 | embryo | 3hN | 1.56 | MC |
| SRR7265388 | embryo | 12hA | 1.88 | MC |
| SRR7265389 | embryo | 12hA | 2.17 | MC |
| SRR7265390 | embryo | 12hA | 1.80 | MC |
| SRR7265391 | embryo | 12hN | 1.96 | MC |
| SRR7265392 | embryo | 12hN | 1.81 | MC |
| SRR7265393 | embryo | 12hN | 1.86 | MC |
| SRR7265394 | embryo | 24hA | 2.10 | MC |
| SRR7265395 | embryo | 24hA | 1.90 | MC |
| SRR7265396 | embryo | 24hA | 1.51 | MC |
| SRR7265397 | embryo | 24hN | 1.75 | MC |
| SRR7265398 | embryo | 24hN | 1.45 | MC |
| SRR7265399 | embryo | 24hN | 1.28 | MC |
| SRR2338866 | endosprem | control | 2.17 | MC |
| SRR2338868 | endosprem | high_temperature | 2.41 | MC |
| SRR2338869 | endosprem | high_temperature | 2.63 | MC |
| SRR976168 | flag_leaf | wild_type | 1.70 | MC |
| SRR1213690 | flower | wt(flower buds) | 3.60 | MC |
| SRR1213691 | flower | wt | 1.47 | MC |
| SRR8240826 | leaf | wild_type | 2.22 | MC |
| SRR8240818 | leaf | wild_type | 1.50 | MC |
| SRR8240819 | leaf | wild_type | 1.76 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.67 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 3.58 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.59 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.57 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.98 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 3.56 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.19 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.57 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.98 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 3.56 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.20 | MC |
| SRR1761528 | leaf | drought | 2.57 | MC |
| SRR1761529 | leaf | drought | 1.98 | MC |
| SRR1761530 | leaf | control | 3.56 | MC |
| SRR1761531 | leaf | control | 3.19 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.33 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.02 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.78 | MC |
| SRR6417967 | leaf | H2O_control | 2.47 | MC |
| SRR6417968 | leaf | H2O_control | 1.69 | MC |
| SRR6417969 | leaf | H2O_control | 3.55 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.12 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.78 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 3.24 | MC |
| SRR5856927 | leaf | control | 2.31 | MC |
| SRR5856929 | leaf | control | 2.01 | MC |
| SRR5856930 | leaf | salt | 1.25 | MC |
| SRR5856931 | leaf | salt | 1.65 | MC |
| SRR5856932 | leaf | salt | 0.84 | MC |
| SRR5856933 | leaf | control | 2.05 | MC |
| SRR5856934 | leaf | control | 2.14 | MC |
| SRR5856935 | leaf | control | 2.19 | MC |
| SRR5856936 | leaf | salt | 1.50 | MC |
| SRR5856937 | leaf | salt | 1.33 | MC |
| SRR5856938 | leaf | salt | 1.62 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 1.45 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.05 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.43 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.23 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 1.02 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.63 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 3.39 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.98 | MC |
| SRR6168979 | leaf | none (control) | 0.33 | MC |
| SRR6168980 | leaf | none (control) | 0.47 | MC |
| SRR6168981 | leaf | none (control) | 2.19 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.62 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.46 | MC |
| SRR5110429 | panicle | Dawn | 1.94 | MC |
| SRR5110430 | panicle | Dawn | 1.77 | MC |
| SRR5110431 | panicle | Dawn | 2.10 | MC |
| SRR5110432 | panicle | Dawn | 2.11 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.99 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.25 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.08 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.66 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.12 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.83 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.56 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.96 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.02 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.88 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.74 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 2.26 | MC |
| SRR5110445 | panicle | Dusk | 1.68 | MC |
| SRR5110446 | panicle | Dusk | 2.63 | MC |
| SRR5110447 | panicle | Dusk | 2.32 | MC |
| SRR5110448 | panicle | Dusk | 3.70 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.84 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.87 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.56 | MC |
| SRR5110452 | panicle | Dawn + 14h | 2.92 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.66 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.82 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.65 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.87 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.56 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.37 | MC |
| SRR5110459 | panicle | Dawn + 21h | 1.69 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.81 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.31 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.96 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.38 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.48 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 2.19 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 2.63 | MC |
| SRR5126147 | root | "mock,1_day" | 3.22 | MC |
| SRR5126148 | root | "mock,1_day" | 2.75 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.59 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 4.10 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 4.96 | MC |
| SRR4947478 | root | control | 1.25 | MC |
| SRR4947479 | root | control | 1.03 | MC |
| SRR4947480 | root | control | 5.06 | MC |
| SRR4947482 | root | Al | 0.85 | MC |
| SRR4947483 | root | Al | 1.23 | MC |
| SRR4947487 | root | control | 1.18 | MC |
| SRR4947488 | root | control | 4.46 | MC |
| SRR4947489 | root | control | 4.73 | MC |
| SRR4947490 | root | Al | 1.64 | MC |
| SRR4947491 | root | Al | 2.17 | MC |
| SRR4947494 | root | control | 1.50 | MC |
| SRR4947498 | root | Al | 2.08 | MC |
| SRR4947499 | root | Al | 1.44 | MC |
| SRR4947502 | root | control | 1.64 | MC |
| SRR4947503 | root | control | 1.29 | MC |
| SRR4947506 | root | Al | 1.02 | MC |
| SRR4947507 | root | Al | 2.16 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.48 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.68 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.87 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.01 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.09 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.24 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.80 | MC |
| SRR1740429 | root_meristematic_zone | wt | 3.33 | MC |
| SRR1740430 | root_meristematic_zone | wt | 3.36 | MC |
| SRR2154082 | seedling | wt | 2.65 | MC |
| SRR2154083 | seedling | wt | 2.39 | MC |
| SRR2154084 | seedling | wt | 2.21 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.11 | MC |
| SRR1944583 | seedling | no_treatment | 4.03 | MC |
| SRR358794 | seedling | wt | 6.27 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.55 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.96 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.03 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.08 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.16 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.25 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.66 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.57 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.81 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.21 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.42 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.53 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.35 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.94 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.55 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 4.01 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.45 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.64 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.38 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.93 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.26 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.39 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.23 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.44 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 4.67 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 5.34 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 5.19 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 7.54 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 6.75 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 6.59 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 5.73 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 5.19 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 5.53 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 4.97 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 4.84 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 5.47 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 4.14 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 5.59 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 5.16 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 5.52 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 6.87 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 5.41 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 5.46 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 5.50 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 6.32 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 5.90 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 8.06 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 4.96 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.66 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 5.43 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 6.25 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.76 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 7.08 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 6.44 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 4.75 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.78 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.82 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.39 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.93 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.42 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.67 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.70 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.44 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.49 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.38 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.68 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.40 | MC |