| SRR4457249 | 2nd_leaf | DAH4 | 3.54 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 4.51 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 3.19 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 4.61 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.81 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 3.44 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.29 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.53 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 4.64 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.08 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.54 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 2.06 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.53 | MC |
| SRR3745125 | anther | wt | 2.80 | MC |
| SRR3745126 | anther | wt | 2.89 | MC |
| SRR3745127 | anther | wt | 3.18 | MC |
| SRR358795 | callus | wt | 7.68 | MC |
| SRR358796 | callus | wt | 4.61 | MC |
| SRR358797 | callus | wt | 4.81 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 2.66 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.59 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.72 | MC |
| SRR4947495 | root | control | 4.15 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.66 | MC |
| SRR7265401 | coleoptile | 2dA | 3.35 | MC |
| SRR7265403 | coleoptile | 2dN | 4.38 | MC |
| SRR7265404 | coleoptile | 2dN | 3.59 | MC |
| SRR7265408 | coleoptile | 3dA | 2.58 | MC |
| SRR7265410 | coleoptile | 3dN | 3.55 | MC |
| SRR7265411 | coleoptile | 3dN | 3.38 | MC |
| SRR7265415 | coleoptile | 4dN | 4.36 | MC |
| SRR7265416 | coleoptile | 4dN | 2.85 | MC |
| SRR7265417 | coleoptile | 4dN | 3.49 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.00 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.42 | MC |
| SRR7265380 | embryo | 1hN | 3.43 | MC |
| SRR7265388 | embryo | 12hA | 2.47 | MC |
| SRR7265389 | embryo | 12hA | 3.73 | MC |
| SRR7265390 | embryo | 12hA | 3.73 | MC |
| SRR7265391 | embryo | 12hN | 2.97 | MC |
| SRR7265392 | embryo | 12hN | 3.48 | MC |
| SRR7265393 | embryo | 12hN | 3.45 | MC |
| SRR7265394 | embryo | 24hA | 2.85 | MC |
| SRR7265395 | embryo | 24hA | 4.50 | MC |
| SRR7265396 | embryo | 24hA | 3.96 | MC |
| SRR7265397 | embryo | 24hN | 4.04 | MC |
| SRR7265399 | embryo | 24hN | 3.20 | MC |
| SRR2338866 | endosprem | control | 3.24 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.88 | MC |
| SRR4457232 | flag_leaf | DAH4 | 2.67 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.88 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.44 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.71 | MC |
| SRR4457236 | flag_leaf | DAH12 | 2.60 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.39 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.33 | MC |
| SRR4457240 | flag_leaf | DAH28 | 3.23 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.81 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.70 | MC |
| SRR4457243 | flag_leaf | DAH36 | 3.73 | MC |
| SRR4457244 | flag_leaf | DAH36 | 3.34 | MC |
| SRR4457245 | flag_leaf | DAH36 | 3.52 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.62 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.80 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.60 | MC |
| SRR8060835 | leaf | wild_type | 1.87 | MC |
| SRR8060836 | leaf | wild_type | 2.54 | MC |
| SRR8060837 | leaf | wild_type | 2.22 | MC |
| SRR8240824 | leaf | wild_type | 1.32 | MC |
| SRR8240825 | leaf | wild_type | 1.16 | MC |
| SRR8240826 | leaf | wild_type | 0.68 | MC |
| SRR8240818 | leaf | wild_type | 0.79 | MC |
| SRR8240819 | leaf | wild_type | 0.80 | MC |
| SRR8240820 | leaf | wild_type | 0.68 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.68 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.12 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.32 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 3.71 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.79 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.44 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.45 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.59 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.25 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.68 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.96 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.52 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.06 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 4.30 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.38 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.95 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.90 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.68 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.98 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.46 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.61 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.57 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.54 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.56 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.60 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.87 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.74 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.25 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.74 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.25 | MC |
| SRR1761530 | leaf | control | 2.74 | MC |
| SRR1761531 | leaf | control | 2.25 | MC |
| SRR504365 | leaf | wt | 3.71 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.36 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.83 | MC |
| SRR6417967 | leaf | H2O_control | 2.10 | MC |
| SRR6417968 | leaf | H2O_control | 1.76 | MC |
| SRR6417969 | leaf | H2O_control | 0.94 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.12 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.08 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 2.94 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 2.32 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.52 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.83 | MC |
| SRR8611900 | leaf | Non-inoculated | 3.60 | MC |
| SRR8611901 | leaf | Non-inoculated | 3.10 | MC |
| SRR8611902 | leaf | Non-inoculated | 3.00 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.54 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.24 | MC |
| SRR1213692 | leaf | wt | 2.39 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 4.03 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 3.02 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 2.69 | MC |
| SRR6502088 | leaf | control | 2.84 | MC |
| SRR6502089 | leaf | control | 1.00 | MC |
| SRR6502090 | leaf | control | 1.24 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.66 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.36 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.01 | MC |
| SRR6502100 | leaf | control | 3.16 | MC |
| SRR6502101 | leaf | control | 1.18 | MC |
| SRR6502102 | leaf | control | 1.27 | MC |
| SRR5856927 | leaf | control | 2.31 | MC |
| SRR5856933 | leaf | control | 2.38 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.56 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.68 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.05 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.33 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.71 | MC |
| SRR6168973 | leaf | none (control) | 1.26 | MC |
| SRR6168974 | leaf | none (control) | 1.55 | MC |
| SRR6168975 | leaf | none (control) | 2.88 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.19 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.84 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.62 | MC |
| SRR8582888 | panicle | AM | 1.04 | MC |
| SRR8582889 | panicle | AM | 0.85 | MC |
| SRR8582890 | panicle | AM | 1.10 | MC |
| SRR8582891 | panicle | PM | 1.75 | MC |
| SRR8582892 | panicle | PM | 2.93 | MC |
| SRR8582893 | panicle | PM | 1.50 | MC |
| SRR5110430 | panicle | Dawn | 5.63 | MC |
| SRR4947496 | root | control | 3.05 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.62 | MC |
| SRR5110439 | panicle | Dawn + 7h | 4.36 | MC |
| SRR5110440 | panicle | Dawn + 7h | 4.30 | MC |
| SRR5110445 | panicle | Dusk | 4.41 | MC |
| SRR5110447 | panicle | Dusk | 3.63 | MC |
| SRR5110448 | panicle | Dusk | 4.41 | MC |
| SRR5110449 | panicle | Dawn + 14h | 4.29 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.23 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.29 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.03 | MC |
| SRR1633182 | panicle | WT | 2.16 | MC |
| SRR1633185 | panicle | WT | 4.19 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.67 | MC |
| SRR4947478 | root | control | 4.30 | MC |
| SRR4947479 | root | control | 3.04 | MC |
| SRR4947480 | root | control | 2.58 | MC |
| SRR4947481 | root | control | 4.08 | MC |
| SRR4947482 | root | Al | 3.55 | MC |
| SRR4947483 | root | Al | 2.92 | MC |
| SRR4947484 | root | Al | 1.82 | MC |
| SRR4947485 | root | Al | 3.91 | MC |
| SRR4947487 | root | control | 3.63 | MC |
| SRR4947488 | root | control | 3.37 | MC |
| SRR4947489 | root | control | 3.54 | MC |
| SRR4947491 | root | Al | 4.82 | MC |
| SRR4947492 | root | Al | 3.58 | MC |
| SRR4947493 | root | Al | 2.91 | MC |
| SRR4947494 | root | control | 3.05 | MC |
| SRR4947497 | root | control | 3.97 | MC |
| SRR4947498 | root | Al | 5.81 | MC |
| SRR4947499 | root | Al | 3.82 | MC |
| SRR4947500 | root | Al | 3.55 | MC |
| SRR4947501 | root | Al | 5.78 | MC |
| SRR4947503 | root | control | 3.89 | MC |
| SRR4947505 | root | control | 4.24 | MC |
| SRR4947508 | root | Al | 4.47 | MC |
| SRR4947509 | root | Al | 3.33 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.73 | MC |
| SRR6502094 | root | control | 4.93 | MC |
| SRR6502095 | root | control | 3.47 | MC |
| SRR6502096 | root | control | 3.73 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.36 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.89 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.34 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.75 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.73 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.41 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.49 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.29 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.03 | MC |
| SRR6441554 | seedling | wild_type | 0.65 | MC |
| SRR6441555 | seedling | wild_type | 1.67 | MC |
| SRR2154086 | seedling | wt | 2.53 | MC |
| SRR2154082 | seedling | wt | 2.00 | MC |
| SRR2154083 | seedling | wt | 3.21 | MC |
| SRR2154084 | seedling | wt | 3.21 | MC |
| SRR2154085 | seedling | wt | 2.97 | MC |
| SRR2154087 | seedling | wt | 3.93 | MC |
| SRR3098741 | seedling | wt | 1.76 | MC |
| SRR3098742 | seedling | wt | 1.47 | MC |
| SRR3098743 | seedling | wt | 1.65 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.33 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.38 | MC |
| SRR1944583 | seedling | no_treatment | 1.64 | MC |
| SRR358791 | seedling | wt | 3.71 | MC |
| SRR358792 | seedling | wt | 4.96 | MC |
| SRR358793 | seedling | wt | 1.52 | MC |
| SRR358794 | seedling | wt | 2.84 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.06 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.46 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.25 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.50 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.08 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.78 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.99 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.65 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.57 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.22 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.75 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.11 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.31 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.97 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.94 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.95 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.31 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.63 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.38 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.54 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.37 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.32 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.59 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.87 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.34 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.51 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.60 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.61 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.26 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.20 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.15 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.02 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.42 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.09 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.42 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.11 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.58 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.77 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 6.48 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 5.57 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 5.14 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 7.05 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 8.34 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 7.47 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 6.41 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 5.71 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 3.80 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 6.00 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 6.49 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 9.03 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 8.91 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 7.16 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 5.47 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 6.16 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.45 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.79 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.47 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 4.07 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 5.51 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.96 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.06 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.58 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.87 | MC |