| SRR3745125 | anther | wt | 1.63 | MC |
| SRR3745127 | anther | wt | 1.75 | MC |
| SRR6320498 | carpel | wt | 1.85 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.44 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.36 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.11 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.41 | MC |
| SRR1213691 | flower | wt | 0.56 | MC |
| SRR8060837 | leaf | wild_type | 0.35 | MC |
| SRR8240825 | leaf | wild_type | 0.22 | MC |
| SRR8240826 | leaf | wild_type | 0.36 | MC |
| SRR8240818 | leaf | wild_type | 0.99 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.63 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.17 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.25 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.38 | MC |
| SRR5856927 | leaf | control | 0.55 | MC |
| SRR5856928 | leaf | control | 0.59 | MC |
| SRR5856929 | leaf | control | 0.17 | MC |
| SRR5856930 | leaf | salt | 0.32 | MC |
| SRR5856933 | leaf | control | 0.29 | MC |
| SRR5856936 | leaf | salt | 0.12 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 6.59 | MC |
| SRR6168979 | leaf | none (control) | 0.91 | MC |
| SRR6168980 | leaf | none (control) | 0.21 | MC |
| SRR5110431 | panicle | Dawn | 0.55 | MC |
| SRR5110432 | panicle | Dawn | 0.59 | MC |
| SRR4947496 | root | control | 0.52 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 4.50 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.83 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.72 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.50 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.73 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.26 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.23 | MC |
| SRR5110445 | panicle | Dusk | 0.99 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.85 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.67 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.24 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.90 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.68 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.44 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.50 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.19 | MC |
| SRR5126147 | root | "mock,1_day" | 0.96 | MC |
| SRR5126148 | root | "mock,1_day" | 1.22 | MC |
| SRR5126149 | root | "mock,1_day" | 1.01 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.58 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.28 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.05 | MC |
| SRR5126153 | root | "mock,7_days" | 0.98 | MC |
| SRR5126155 | root | "mock,7_days" | 0.43 | MC |
| SRR5126157 | root | "mock,7_days" | 0.53 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.34 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.36 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.75 | MC |
| SRR5126169 | root | "mock,14_days" | 0.62 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.56 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.62 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.74 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.06 | MC |
| SRR1213694 | root | wt | 0.40 | MC |
| SRR4947479 | root | control | 1.44 | MC |
| SRR4947483 | root | Al | 0.82 | MC |
| SRR4947485 | root | Al | 0.62 | MC |
| SRR4947491 | root | Al | 0.60 | MC |
| SRR4947500 | root | Al | 0.59 | MC |
| SRR4947501 | root | Al | 0.48 | MC |
| SRR4947508 | root | Al | 0.80 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.49 | MC |
| SRR6502108 | root | control | 0.38 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.47 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.67 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.17 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.01 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.00 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.71 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.80 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.21 | MC |
| SRR2154083 | seedling | wt | 0.62 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.64 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.75 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.47 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.60 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.46 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.69 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.62 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.74 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.49 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.73 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.28 | MC |