| SRR4457249 | 2nd_leaf | DAH4 | 0.54 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.41 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.22 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.34 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.43 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.48 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.35 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.43 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.55 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.00 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.69 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.18 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.29 | MC |
| SRR358795 | callus | wt | 2.07 | MC |
| SRR6320473 | carpel | wt | 2.26 | MC |
| SRR6320498 | carpel | wt | 2.05 | MC |
| SRR5560727 | caryopsis | wild_type | 3.77 | MC |
| SRR5560728 | caryopsis | wild_type | 4.01 | MC |
| SRR5560729 | caryopsis | wild_type | 4.00 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.45 | MC |
| SRR7265378 | embryo | 1hA | 3.03 | MC |
| SRR7265382 | embryo | 3hA | 2.74 | MC |
| SRR7265384 | embryo | 3hA | 2.75 | MC |
| SRR7265385 | embryo | 3hN | 2.78 | MC |
| SRR7265386 | embryo | 3hN | 2.56 | MC |
| SRR7265387 | embryo | 3hN | 2.32 | MC |
| SRR7265391 | embryo | 12hN | 4.68 | MC |
| SRR7265394 | embryo | 24hA | 3.97 | MC |
| SRR7265395 | embryo | 24hA | 4.18 | MC |
| SRR7265397 | embryo | 24hN | 4.62 | MC |
| SRR2338866 | endosprem | control | 1.55 | MC |
| SRR2338869 | endosprem | high_temperature | 2.51 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.81 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.71 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.12 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.87 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.75 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.97 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.86 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.94 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.48 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.85 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.83 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.25 | MC |
| SRR4457248 | flag_leaf | DAH44 | 0.75 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.64 | MC |
| SRR1213691 | flower | wt | 3.55 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 4.05 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.80 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.87 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.35 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.30 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.94 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.35 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.94 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.91 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.65 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.74 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 3.69 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.20 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.28 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.09 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.20 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.88 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.94 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.22 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.87 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.81 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.29 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 3.48 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.86 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.98 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 3.50 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.14 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 3.50 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.14 | MC |
| SRR1761529 | leaf | drought | 3.50 | MC |
| SRR1761530 | leaf | control | 1.14 | MC |
| SRR504365 | leaf | wt | 2.83 | MC |
| SRR6417968 | leaf | H2O_control | 1.07 | MC |
| SRR6417969 | leaf | H2O_control | 2.39 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.65 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.22 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.28 | MC |
| SRR1213693 | leaf | wt | 3.26 | MC |
| SRR6502089 | leaf | control | 2.77 | MC |
| SRR6502090 | leaf | control | 2.47 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 3.75 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.74 | MC |
| SRR6502101 | leaf | control | 2.90 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.54 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 6.07 | MC |
| SRR6168979 | leaf | none (control) | 1.75 | MC |
| SRR6168980 | leaf | none (control) | 1.08 | MC |
| SRR6168981 | leaf | none (control) | 2.52 | MC |
| SRR8582888 | panicle | AM | 1.90 | MC |
| SRR8582891 | panicle | PM | 3.45 | MC |
| SRR8582892 | panicle | PM | 3.28 | MC |
| SRR5110429 | panicle | Dawn | 4.20 | MC |
| SRR5110430 | panicle | Dawn | 2.11 | MC |
| SRR5110431 | panicle | Dawn | 2.81 | MC |
| SRR5110432 | panicle | Dawn | 2.82 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.61 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.71 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.43 | MC |
| SRR5110440 | panicle | Dawn + 7h | 4.87 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 3.29 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 3.81 | MC |
| SRR5110448 | panicle | Dusk | 4.79 | MC |
| SRR5110449 | panicle | Dawn + 14h | 5.10 | MC |
| SRR5110451 | panicle | Dawn + 14h | 3.52 | MC |
| SRR5110452 | panicle | Dawn + 14h | 5.01 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 2.45 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 3.69 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 4.72 | MC |
| SRR5110457 | panicle | Dawn + 21h | 3.35 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.62 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.13 | MC |
| SRR5110460 | panicle | Dawn + 21h | 4.45 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.07 | MC |
| SRR1633182 | panicle | WT | 0.27 | MC |
| SRR1633185 | panicle | WT | 0.98 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 3.09 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.64 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 3.49 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 5.85 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 5.62 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 3.43 | MC |
| SRR1213694 | root | wt | 2.10 | MC |
| SRR1213695 | root | wt | 2.55 | MC |
| SRR4947478 | root | control | 3.97 | MC |
| SRR4947481 | root | control | 5.34 | MC |
| SRR4947483 | root | Al | 4.08 | MC |
| SRR4947489 | root | control | 3.86 | MC |
| SRR4947497 | root | control | 4.91 | MC |
| SRR4947505 | root | control | 4.26 | MC |
| SRR4947508 | root | Al | 5.00 | MC |
| SRR6502095 | root | control | 4.79 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.88 | MC |
| SRR2154084 | seedling | wt | 1.55 | MC |
| SRR3098741 | seedling | wt | 1.73 | MC |
| SRR3098742 | seedling | wt | 1.25 | MC |
| SRR3098743 | seedling | wt | 1.46 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.75 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.49 | MC |
| SRR358794 | seedling | wt | 0.79 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.42 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.91 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.33 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.95 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.85 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.06 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.69 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.70 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.69 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.41 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.07 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.46 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.23 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.46 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.39 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.89 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.77 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.90 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.71 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.42 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 6.06 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 4.96 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.70 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.55 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.68 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 3.07 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 7.35 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 6.37 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 3.32 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 3.69 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.03 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.83 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.11 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.37 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 3.16 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.28 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.96 | MC |