| SRR4457250 | 2nd_leaf | DAH4 | 0.83 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.62 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.32 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.28 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.61 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.77 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.19 | MC |
| SRR7265406 | coleoptile | 3dA | 0.36 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.55 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 3.06 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.54 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.10 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.96 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.22 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.46 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.40 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.45 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.32 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.45 | MC |
| SRR1213691 | flower | wt | 0.63 | MC |
| SRR8060835 | leaf | wild_type | 0.56 | MC |
| SRR8060836 | leaf | wild_type | 1.16 | MC |
| SRR8060837 | leaf | wild_type | 0.90 | MC |
| SRR8240824 | leaf | wild_type | 0.78 | MC |
| SRR8240825 | leaf | wild_type | 1.70 | MC |
| SRR8240826 | leaf | wild_type | 0.68 | MC |
| SRR8240818 | leaf | wild_type | 0.58 | MC |
| SRR8240820 | leaf | wild_type | 0.37 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.92 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.47 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.20 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.39 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.19 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.53 | MC |
| SRR504365 | leaf | wt | 0.36 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.59 | MC |
| SRR6417967 | leaf | H2O_control | 0.63 | MC |
| SRR6417969 | leaf | H2O_control | 0.48 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.62 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.23 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.40 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.43 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.38 | MC |
| SRR1213692 | leaf | wt | 1.04 | MC |
| SRR1213693 | leaf | wt | 0.77 | MC |
| SRR5856930 | leaf | salt | 0.53 | MC |
| SRR5856931 | leaf | salt | 1.86 | MC |
| SRR5856932 | leaf | salt | 1.08 | MC |
| SRR5856934 | leaf | control | 1.31 | MC |
| SRR5856935 | leaf | control | 2.16 | MC |
| SRR5856936 | leaf | salt | 1.30 | MC |
| SRR5856937 | leaf | salt | 0.77 | MC |
| SRR5856938 | leaf | salt | 1.25 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.80 | MC |
| SRR6168979 | leaf | none (control) | 0.19 | MC |
| SRR8582888 | panicle | AM | 1.25 | MC |
| SRR8582889 | panicle | AM | 0.71 | MC |
| SRR8582890 | panicle | AM | 1.19 | MC |
| SRR8582891 | panicle | PM | 1.99 | MC |
| SRR8582892 | panicle | PM | 1.54 | MC |
| SRR8582893 | panicle | PM | 1.64 | MC |
| SRR5110429 | panicle | Dawn | 1.14 | MC |
| SRR5110431 | panicle | Dawn | 0.60 | MC |
| SRR5110432 | panicle | Dawn | 1.96 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.94 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 0.67 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.02 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.56 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.28 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.23 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.33 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 3.16 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.68 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.48 | MC |
| SRR5110445 | panicle | Dusk | 0.45 | MC |
| SRR5110446 | panicle | Dusk | 2.82 | MC |
| SRR5110447 | panicle | Dusk | 1.17 | MC |
| SRR5110448 | panicle | Dusk | 1.73 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.84 | MC |
| SRR5110450 | panicle | Dawn + 14h | 3.87 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.78 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 2.60 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.66 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 2.49 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.27 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.28 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.57 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.20 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.25 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.22 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.69 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.43 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.52 | MC |
| SRR1213695 | root | wt | 0.54 | MC |
| SRR4947478 | root | control | 1.18 | MC |
| SRR4947482 | root | Al | 1.65 | MC |
| SRR4947483 | root | Al | 2.33 | MC |
| SRR4947490 | root | Al | 0.51 | MC |
| SRR4947491 | root | Al | 3.65 | MC |
| SRR4947499 | root | Al | 2.50 | MC |
| SRR4947503 | root | control | 1.64 | MC |
| SRR4947506 | root | Al | 1.35 | MC |
| SRR6441555 | seedling | wild_type | 0.44 | MC |
| SRR2154086 | seedling | wt | 0.70 | MC |
| SRR2154084 | seedling | wt | 1.01 | MC |
| SRR2154085 | seedling | wt | 0.96 | MC |
| SRR2154087 | seedling | wt | 0.69 | MC |
| SRR3098741 | seedling | wt | 1.70 | MC |
| SRR3098742 | seedling | wt | 1.61 | MC |
| SRR3098743 | seedling | wt | 2.48 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.85 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.29 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.71 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.85 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.72 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.47 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.32 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.30 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.53 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.51 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.26 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 4.33 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.71 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.92 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.63 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.66 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.16 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.89 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.67 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.96 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.68 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.97 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.36 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.01 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.79 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.65 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.40 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.92 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.48 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.58 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.43 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.52 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.25 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.18 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.19 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.36 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 2.36 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.49 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.19 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.34 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 3.22 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.67 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 3.69 | MC |