| SRR358795 | callus | wt | 4.57 | MC |
| SRR358796 | callus | wt | 3.88 | MC |
| SRR358797 | callus | wt | 1.62 | MC |
| SRR358798 | callus | wt | 1.93 | MC |
| SRR5560728 | caryopsis | wild_type | 0.79 | MC |
| SRR5560729 | caryopsis | wild_type | 0.36 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.14 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.05 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.84 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 4.00 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.60 | MC |
| SRR8060835 | leaf | wild_type | 0.45 | MC |
| SRR8060836 | leaf | wild_type | 0.37 | MC |
| SRR8060837 | leaf | wild_type | 0.26 | MC |
| SRR8240819 | leaf | wild_type | 0.34 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.61 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.21 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.30 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.24 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.67 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.89 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.94 | MC |
| SRR5856927 | leaf | control | 1.70 | MC |
| SRR5856928 | leaf | control | 1.52 | MC |
| SRR5856929 | leaf | control | 1.06 | MC |
| SRR5856930 | leaf | salt | 1.41 | MC |
| SRR5856931 | leaf | salt | 0.88 | MC |
| SRR5856932 | leaf | salt | 1.19 | MC |
| SRR5856933 | leaf | control | 1.92 | MC |
| SRR5856934 | leaf | control | 1.66 | MC |
| SRR5856935 | leaf | control | 0.84 | MC |
| SRR5856936 | leaf | salt | 0.85 | MC |
| SRR5856937 | leaf | salt | 0.77 | MC |
| SRR5856938 | leaf | salt | 0.87 | MC |
| SRR6168975 | leaf | none (control) | 0.33 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.43 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.25 | MC |
| SRR4947496 | root | control | 3.95 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.20 | MC |
| SRR5126147 | root | "mock,1_day" | 1.96 | MC |
| SRR5126148 | root | "mock,1_day" | 1.75 | MC |
| SRR5126149 | root | "mock,1_day" | 1.06 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.44 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.68 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.03 | MC |
| SRR5126153 | root | "mock,7_days" | 1.42 | MC |
| SRR5126155 | root | "mock,7_days" | 0.95 | MC |
| SRR5126157 | root | "mock,7_days" | 0.40 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.54 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.73 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 2.47 | MC |
| SRR5126165 | root | "mock,14_days" | 2.36 | MC |
| SRR5126167 | root | "mock,14_days" | 1.33 | MC |
| SRR5126169 | root | "mock,14_days" | 1.18 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.07 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.71 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.56 | MC |
| SRR1213694 | root | wt | 1.78 | MC |
| SRR4947480 | root | control | 4.72 | MC |
| SRR4947481 | root | control | 2.56 | MC |
| SRR4947485 | root | Al | 2.75 | MC |
| SRR4947488 | root | control | 3.90 | MC |
| SRR4947489 | root | control | 2.48 | MC |
| SRR4947493 | root | Al | 2.91 | MC |
| SRR4947497 | root | control | 2.81 | MC |
| SRR4947500 | root | Al | 3.96 | MC |
| SRR4947501 | root | Al | 2.86 | MC |
| SRR4947504 | root | control | 4.27 | MC |
| SRR4947505 | root | control | 2.03 | MC |
| SRR4947508 | root | Al | 3.96 | MC |
| SRR4947509 | root | Al | 1.02 | MC |
| SRR6502091 | root | 100 mM NaCl | 2.07 | MC |
| SRR6502092 | root | 100 mM NaCl | 3.27 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.91 | MC |
| SRR6502094 | root | control | 3.18 | MC |
| SRR6502095 | root | control | 3.29 | MC |
| SRR6502096 | root | control | 2.64 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.17 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.01 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.61 | MC |
| SRR6502106 | root | control | 1.43 | MC |
| SRR6502107 | root | control | 1.06 | MC |
| SRR6502108 | root | control | 1.45 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.54 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.36 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.61 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.60 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.63 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.19 | MC |
| SRR6441554 | seedling | wild_type | 0.54 | MC |
| SRR2154083 | seedling | wt | 1.24 | MC |
| SRR2154087 | seedling | wt | 0.47 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.35 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.24 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.88 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.18 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.28 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.84 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.00 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.92 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.60 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.58 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.67 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.18 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.24 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.48 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.37 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.12 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 3.08 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.34 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.96 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.07 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.37 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.36 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.78 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.50 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.36 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.23 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.20 | MC |