| SRR4457250 | 2nd_leaf | DAH4 | 0.42 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.38 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.44 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.32 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.69 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.72 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.60 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.49 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.32 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.55 | MC |
| SRR7265401 | coleoptile | 2dA | 0.79 | MC |
| SRR7265406 | coleoptile | 3dA | 1.53 | MC |
| SRR7265407 | coleoptile | 3dA | 1.70 | MC |
| SRR7265408 | coleoptile | 3dA | 1.58 | MC |
| SRR7265409 | coleoptile | 3dN | 1.04 | MC |
| SRR7265413 | coleoptile | 4dA | 2.12 | MC |
| SRR7265414 | coleoptile | 4dA | 1.49 | MC |
| SRR7265415 | coleoptile | 4dN | 0.89 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.25 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.84 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.57 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.09 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.61 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.72 | MC |
| SRR7265376 | embryo | 1hA | 1.18 | MC |
| SRR7265377 | embryo | 1hA | 1.82 | MC |
| SRR7265378 | embryo | 1hA | 1.05 | MC |
| SRR7265379 | embryo | 1hN | 1.24 | MC |
| SRR7265384 | embryo | 3hA | 1.44 | MC |
| SRR7265386 | embryo | 3hN | 0.56 | MC |
| SRR7265389 | embryo | 12hA | 0.88 | MC |
| SRR7265399 | embryo | 24hN | 0.55 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.35 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.34 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.29 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.55 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.33 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.47 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.62 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.49 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.52 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.12 | MC |
| SRR8060835 | leaf | wild_type | 0.20 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.82 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.45 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.88 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.57 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.34 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.61 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.36 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.63 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.33 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.63 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.81 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.78 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.51 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.28 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.24 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.27 | MC |
| SRR1213693 | leaf | wt | 0.75 | MC |
| SRR5856929 | leaf | control | 0.24 | MC |
| SRR6168979 | leaf | none (control) | 0.52 | MC |
| SRR6168980 | leaf | none (control) | 0.99 | MC |
| SRR6168981 | leaf | none (control) | 0.24 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.27 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.51 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.29 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.32 | MC |
| SRR5126147 | root | "mock,1_day" | 0.35 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.29 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.00 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.52 | MC |
| SRR5126153 | root | "mock,7_days" | 0.34 | MC |
| SRR5126157 | root | "mock,7_days" | 0.52 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.90 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.60 | MC |
| SRR5126165 | root | "mock,14_days" | 0.54 | MC |
| SRR5126167 | root | "mock,14_days" | 1.10 | MC |
| SRR5126169 | root | "mock,14_days" | 0.55 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.52 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.66 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.47 | MC |
| SRR1213694 | root | wt | 1.32 | MC |
| SRR1213695 | root | wt | 0.90 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.42 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.43 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.85 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.66 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.63 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.47 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.87 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.46 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.33 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.19 | MC |