| SRR5560727 | caryopsis | wild_type | 1.36 | MC |
| SRR5560728 | caryopsis | wild_type | 0.37 | MC |
| SRR5560729 | caryopsis | wild_type | 0.94 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.17 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.81 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.39 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.51 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.93 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.18 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.28 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.38 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.44 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.81 | MC |
| SRR8060837 | leaf | wild_type | 0.34 | MC |
| SRR8240826 | leaf | wild_type | 0.51 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.28 | MC |
| SRR8611901 | leaf | Non-inoculated | 3.44 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.77 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.51 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.90 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.75 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.80 | MC |
| SRR6502088 | leaf | control | 0.63 | MC |
| SRR6502090 | leaf | control | 0.52 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.70 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.35 | MC |
| SRR6502101 | leaf | control | 0.50 | MC |
| SRR6168973 | leaf | none (control) | 0.85 | MC |
| SRR6168974 | leaf | none (control) | 2.04 | MC |
| SRR6168975 | leaf | none (control) | 1.24 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.50 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.80 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.33 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.98 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.87 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.10 | MC |
| SRR1213695 | root | wt | 0.17 | MC |
| SRR4947485 | root | Al | 0.86 | MC |
| SRR6502094 | root | control | 0.71 | MC |
| SRR6502095 | root | control | 0.42 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.69 | MC |
| SRR6502106 | root | control | 0.44 | MC |
| SRR6502108 | root | control | 0.34 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.46 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.29 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.47 | MC |
| SRR6441555 | seedling | wild_type | 0.84 | MC |
| SRR3098743 | seedling | wt | 0.22 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.18 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.38 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.59 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.81 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.88 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.11 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 2.83 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.56 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.22 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.24 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.31 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.35 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.44 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.45 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.31 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.25 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 0.99 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.76 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.36 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.52 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.52 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.62 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.56 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.49 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.40 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.75 | MC |