| SRR5560728 | caryopsis | wild_type | 0.34 | MC |
| SRR5560729 | caryopsis | wild_type | 1.14 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.24 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.66 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.49 | MC |
| SRR4947495 | root | control | 1.47 | MC |
| SRR7265400 | coleoptile | 2dA | 2.33 | MC |
| SRR7265401 | coleoptile | 2dA | 1.48 | MC |
| SRR7265402 | coleoptile | 2dA | 2.07 | MC |
| SRR7265403 | coleoptile | 2dN | 0.70 | MC |
| SRR7265404 | coleoptile | 2dN | 1.67 | MC |
| SRR7265405 | coleoptile | 2dN | 1.33 | MC |
| SRR7265406 | coleoptile | 3dA | 2.47 | MC |
| SRR7265407 | coleoptile | 3dA | 1.82 | MC |
| SRR7265409 | coleoptile | 3dN | 2.11 | MC |
| SRR7265410 | coleoptile | 3dN | 1.48 | MC |
| SRR7265411 | coleoptile | 3dN | 1.63 | MC |
| SRR7265415 | coleoptile | 4dN | 2.55 | MC |
| SRR7265416 | coleoptile | 4dN | 1.06 | MC |
| SRR7265417 | coleoptile | 4dN | 0.98 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.97 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.53 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.56 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.45 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.61 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.53 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.95 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.88 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.90 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.54 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.33 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.13 | MC |
| SRR7265376 | embryo | 1hA | 1.97 | MC |
| SRR7265377 | embryo | 1hA | 3.39 | MC |
| SRR7265379 | embryo | 1hN | 2.24 | MC |
| SRR7265380 | embryo | 1hN | 3.63 | MC |
| SRR7265381 | embryo | 1hN | 2.57 | MC |
| SRR7265382 | embryo | 3hA | 2.20 | MC |
| SRR7265383 | embryo | 3hA | 2.61 | MC |
| SRR7265384 | embryo | 3hA | 2.39 | MC |
| SRR7265385 | embryo | 3hN | 2.25 | MC |
| SRR7265386 | embryo | 3hN | 1.51 | MC |
| SRR7265387 | embryo | 3hN | 1.82 | MC |
| SRR7265388 | embryo | 12hA | 2.34 | MC |
| SRR7265389 | embryo | 12hA | 2.98 | MC |
| SRR7265390 | embryo | 12hA | 1.97 | MC |
| SRR7265391 | embryo | 12hN | 1.32 | MC |
| SRR7265392 | embryo | 12hN | 1.47 | MC |
| SRR7265394 | embryo | 24hA | 2.56 | MC |
| SRR7265395 | embryo | 24hA | 3.34 | MC |
| SRR7265396 | embryo | 24hA | 1.04 | MC |
| SRR7265397 | embryo | 24hN | 0.83 | MC |
| SRR7265398 | embryo | 24hN | 0.73 | MC |
| SRR7265399 | embryo | 24hN | 0.84 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.40 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 2.80 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.10 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.38 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.32 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.33 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.20 | MC |
| SRR5856928 | leaf | control | 0.19 | MC |
| SRR5856935 | leaf | control | 0.39 | MC |
| SRR5856936 | leaf | salt | 0.25 | MC |
| SRR8582890 | panicle | AM | 0.37 | MC |
| SRR5110429 | panicle | Dawn | 0.89 | MC |
| SRR5110431 | panicle | Dawn | 0.65 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.86 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.87 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.91 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.80 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.58 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.50 | MC |
| SRR1633185 | panicle | WT | 3.71 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.37 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.74 | MC |
| SRR5126147 | root | "mock,1_day" | 4.11 | MC |
| SRR5126148 | root | "mock,1_day" | 2.76 | MC |
| SRR5126149 | root | "mock,1_day" | 1.53 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.83 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.92 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.08 | MC |
| SRR5126153 | root | "mock,7_days" | 2.22 | MC |
| SRR5126155 | root | "mock,7_days" | 1.14 | MC |
| SRR5126157 | root | "mock,7_days" | 2.21 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.89 | MC |
| SRR5126165 | root | "mock,14_days" | 2.70 | MC |
| SRR5126167 | root | "mock,14_days" | 0.54 | MC |
| SRR5126169 | root | "mock,14_days" | 0.76 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.77 | MC |
| SRR4947484 | root | Al | 0.54 | MC |
| SRR4947493 | root | Al | 0.96 | MC |
| SRR4947500 | root | Al | 1.67 | MC |
| SRR4947502 | root | control | 0.98 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.09 | MC |
| SRR1740434 | root_differentiation_zone | wt | 3.37 | MC |
| SRR6441554 | seedling | wild_type | 0.54 | MC |
| SRR6441555 | seedling | wild_type | 0.30 | MC |
| SRR2154082 | seedling | wt | 0.67 | MC |
| SRR2154084 | seedling | wt | 0.39 | MC |
| SRR3098741 | seedling | wt | 0.43 | MC |
| SRR3098742 | seedling | wt | 0.21 | MC |
| SRR3098743 | seedling | wt | 0.46 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.79 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.57 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.64 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.52 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.68 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.61 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.71 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.66 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.16 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.16 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.53 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.48 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.57 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.79 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.69 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.54 | MC |