| SRR4457256 | 2nd_leaf | DAH20 | 3.48 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.05 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.23 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.01 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.01 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.55 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.12 | MC |
| SRR7265402 | coleoptile | 2dA | 3.32 | MC |
| SRR7265403 | coleoptile | 2dN | 4.22 | MC |
| SRR7265404 | coleoptile | 2dN | 1.26 | MC |
| SRR7265406 | coleoptile | 3dA | 2.14 | MC |
| SRR7265407 | coleoptile | 3dA | 1.38 | MC |
| SRR7265408 | coleoptile | 3dA | 1.05 | MC |
| SRR7265409 | coleoptile | 3dN | 3.53 | MC |
| SRR7265410 | coleoptile | 3dN | 2.12 | MC |
| SRR7265411 | coleoptile | 3dN | 2.94 | MC |
| SRR7265412 | coleoptile | 4dA | 3.14 | MC |
| SRR7265414 | coleoptile | 4dA | 3.14 | MC |
| SRR7265415 | coleoptile | 4dN | 0.70 | MC |
| SRR7265416 | coleoptile | 4dN | 3.39 | MC |
| SRR7265417 | coleoptile | 4dN | 1.17 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.20 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.23 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.18 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 3.21 | MC |
| SRR7265376 | embryo | 1hA | 1.52 | MC |
| SRR7265382 | embryo | 3hA | 3.44 | MC |
| SRR7265383 | embryo | 3hA | 3.52 | MC |
| SRR7265384 | embryo | 3hA | 3.78 | MC |
| SRR7265385 | embryo | 3hN | 2.99 | MC |
| SRR7265386 | embryo | 3hN | 2.54 | MC |
| SRR7265387 | embryo | 3hN | 2.73 | MC |
| SRR7265388 | embryo | 12hA | 3.44 | MC |
| SRR7265390 | embryo | 12hA | 3.29 | MC |
| SRR7265391 | embryo | 12hN | 1.46 | MC |
| SRR7265392 | embryo | 12hN | 2.34 | MC |
| SRR7265393 | embryo | 12hN | 1.74 | MC |
| SRR7265394 | embryo | 24hA | 0.77 | MC |
| SRR7265395 | embryo | 24hA | 2.23 | MC |
| SRR7265396 | embryo | 24hA | 4.26 | MC |
| SRR7265397 | embryo | 24hN | 1.40 | MC |
| SRR7265398 | embryo | 24hN | 3.07 | MC |
| SRR7265399 | embryo | 24hN | 2.00 | MC |
| SRR2338868 | endosprem | high_temperature | 1.62 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.90 | MC |
| SRR4457236 | flag_leaf | DAH12 | 2.81 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.50 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.82 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.41 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.49 | MC |
| SRR4457243 | flag_leaf | DAH36 | 3.41 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.88 | MC |
| SRR4457246 | flag_leaf | DAH44 | 3.89 | MC |
| SRR4457247 | flag_leaf | DAH44 | 4.85 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.32 | MC |
| SRR8060835 | leaf | wild_type | 1.36 | MC |
| SRR8060836 | leaf | wild_type | 2.78 | MC |
| SRR8060837 | leaf | wild_type | 2.02 | MC |
| SRR8240818 | leaf | wild_type | 0.28 | MC |
| SRR8240820 | leaf | wild_type | 0.30 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.90 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 2.28 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.62 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.99 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.93 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.96 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.34 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 5.95 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 4.47 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.04 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.86 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 7.34 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.54 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 4.06 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 3.17 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.22 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.55 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.55 | MC |
| SRR1761531 | leaf | control | 2.55 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.98 | MC |
| SRR6417969 | leaf | H2O_control | 0.61 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.07 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.72 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.11 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.29 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.83 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.37 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.67 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.85 | MC |
| SRR1213692 | leaf | wt | 3.05 | MC |
| SRR6502088 | leaf | control | 0.43 | MC |
| SRR6502090 | leaf | control | 1.25 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 4.16 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 4.00 | MC |
| SRR6502100 | leaf | control | 1.77 | MC |
| SRR6502102 | leaf | control | 2.36 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.67 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 1.71 | MC |
| SRR8582888 | panicle | AM | 1.51 | MC |
| SRR8582889 | panicle | AM | 1.16 | MC |
| SRR8582890 | panicle | AM | 1.07 | MC |
| SRR8582891 | panicle | PM | 3.32 | MC |
| SRR8582892 | panicle | PM | 6.54 | MC |
| SRR8582893 | panicle | PM | 2.13 | MC |
| SRR1633182 | panicle | WT | 2.71 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.57 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 5.53 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.72 | MC |
| SRR5126147 | root | "mock,1_day" | 0.96 | MC |
| SRR5126148 | root | "mock,1_day" | 1.47 | MC |
| SRR5126149 | root | "mock,1_day" | 0.72 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.79 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.36 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.00 | MC |
| SRR5126153 | root | "mock,7_days" | 4.09 | MC |
| SRR5126155 | root | "mock,7_days" | 2.88 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 4.34 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.30 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 2.19 | MC |
| SRR5126165 | root | "mock,14_days" | 4.09 | MC |
| SRR5126169 | root | "mock,14_days" | 3.92 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.73 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.77 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.41 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.41 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.06 | MC |
| SRR1213694 | root | wt | 2.32 | MC |
| SRR6502095 | root | control | 3.46 | MC |
| SRR6502096 | root | control | 0.92 | MC |
| SRR6502106 | root | control | 0.42 | MC |
| SRR6502107 | root | control | 3.20 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.58 | MC |
| SRR1740432 | root_elongation_zone | wt | 3.14 | MC |
| SRR1740428 | root_meristematic_zone | wt | 4.31 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.72 | MC |
| SRR6441554 | seedling | wild_type | 0.62 | MC |
| SRR6441555 | seedling | wild_type | 0.58 | MC |
| SRR3098741 | seedling | wt | 2.33 | MC |
| SRR3098742 | seedling | wt | 1.70 | MC |
| SRR3098743 | seedling | wt | 1.49 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.83 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.78 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.19 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.70 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.57 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.07 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.72 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.07 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.41 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.42 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.70 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.73 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.96 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.56 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.13 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.79 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.56 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.85 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.03 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.57 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.65 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.76 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 6.43 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 5.80 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 5.01 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.66 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.80 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.66 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.45 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.61 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.91 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.70 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 3.30 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 3.12 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 6.10 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 4.53 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 5.03 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 8.50 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.02 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.06 | MC |