| SRR5560727 | caryopsis | wild_type | 0.24 | MC |
| SRR5560729 | caryopsis | wild_type | 0.34 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.42 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.34 | MC |
| SRR2338868 | endosprem | high_temperature | 0.42 | MC |
| SRR8240824 | leaf | wild_type | 0.49 | MC |
| SRR8240820 | leaf | wild_type | 0.36 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.30 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.42 | MC |
| SRR6417969 | leaf | H2O_control | 0.50 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.30 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.21 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.40 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.56 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.35 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.51 | MC |
| SRR6168973 | leaf | none (control) | 0.44 | MC |
| SRR8582888 | panicle | AM | 0.67 | MC |
| SRR8582889 | panicle | AM | 0.39 | MC |
| SRR8582890 | panicle | AM | 0.21 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.64 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.37 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.86 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.58 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.27 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.41 | MC |
| SRR5126148 | root | "mock,1_day" | 0.50 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.42 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.39 | MC |
| SRR5126153 | root | "mock,7_days" | 0.36 | MC |
| SRR5126157 | root | "mock,7_days" | 0.42 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.58 | MC |
| SRR5126169 | root | "mock,14_days" | 0.40 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.41 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.72 | MC |
| SRR1213695 | root | wt | 0.16 | MC |
| SRR4947482 | root | Al | 1.07 | MC |
| SRR2154087 | seedling | wt | 0.75 | MC |
| SRR3098741 | seedling | wt | 0.30 | MC |
| SRR3098742 | seedling | wt | 0.29 | MC |
| SRR3098743 | seedling | wt | 0.28 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.39 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.83 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.68 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.46 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.96 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.53 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.77 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.94 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.66 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.46 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.22 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.33 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.54 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.47 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.38 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.41 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.73 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.44 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.38 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.38 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.85 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.91 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.25 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.50 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 2.11 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.19 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 2.11 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.82 | MC |