| SRR4457249 | 2nd_leaf | DAH4 | 0.74 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.52 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.47 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.07 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.92 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.44 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.74 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.65 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.99 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.67 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.85 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.98 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.35 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.80 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.65 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.48 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.11 | MC |
| SRR5560727 | caryopsis | wild_type | 0.42 | MC |
| SRR5560728 | caryopsis | wild_type | 0.48 | MC |
| SRR5560729 | caryopsis | wild_type | 0.37 | MC |
| SRR2338867 | endosprem | control | 1.01 | MC |
| SRR2338868 | endosprem | high_temperature | 1.05 | MC |
| SRR2338869 | endosprem | high_temperature | 1.63 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.39 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.62 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.51 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.40 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.74 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.70 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.48 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.45 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.49 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.97 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.32 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.37 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.80 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.76 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.01 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.94 | MC |
| SRR8240818 | leaf | wild_type | 0.47 | MC |
| SRR8240819 | leaf | wild_type | 0.27 | MC |
| SRR8240820 | leaf | wild_type | 0.40 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.29 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.99 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.81 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.07 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.39 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.86 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.19 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.25 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.48 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.95 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.53 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.25 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.39 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.56 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.28 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.48 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.06 | MC |
| SRR504365 | leaf | wt | 1.52 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.51 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.34 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.27 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.55 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.46 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.39 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.31 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.37 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.29 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.57 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.43 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.40 | MC |
| SRR6168973 | leaf | none (control) | 0.61 | MC |
| SRR6168974 | leaf | none (control) | 0.80 | MC |
| SRR6168981 | leaf | none (control) | 0.24 | MC |
| SRR8582888 | panicle | AM | 0.32 | MC |
| SRR8582889 | panicle | AM | 0.19 | MC |
| SRR8582890 | panicle | AM | 0.35 | MC |
| SRR8582891 | panicle | PM | 1.25 | MC |
| SRR8582892 | panicle | PM | 1.96 | MC |
| SRR8582893 | panicle | PM | 0.41 | MC |
| SRR1633182 | panicle | WT | 0.45 | MC |
| SRR1633185 | panicle | WT | 1.02 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.40 | MC |
| SRR5126148 | root | "mock,1_day" | 0.29 | MC |
| SRR5126153 | root | "mock,7_days" | 0.44 | MC |
| SRR5126157 | root | "mock,7_days" | 1.20 | MC |
| SRR5126165 | root | "mock,14_days" | 0.46 | MC |
| SRR5126169 | root | "mock,14_days" | 0.46 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.42 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.53 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.56 | MC |
| SRR1213694 | root | wt | 0.22 | MC |
| SRR1213695 | root | wt | 0.19 | MC |
| SRR6441554 | seedling | wild_type | 0.36 | MC |
| SRR6441555 | seedling | wild_type | 0.64 | MC |
| SRR2154086 | seedling | wt | 3.43 | MC |
| SRR2154085 | seedling | wt | 2.07 | MC |
| SRR2154087 | seedling | wt | 2.10 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.77 | MC |
| SRR358791 | seedling | wt | 0.82 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.67 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.98 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.11 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.39 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.32 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.70 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.92 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.81 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.65 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.73 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.80 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.81 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.49 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.26 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.20 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.85 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.81 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.76 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.44 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.29 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.54 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.37 | MC |