| SRR358795 | callus | wt | 8.51 | MC |
| SRR358796 | callus | wt | 6.82 | MC |
| SRR358797 | callus | wt | 5.66 | MC |
| SRR358798 | callus | wt | 7.04 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.54 | MC |
| SRR7265376 | embryo | 1hA | 0.57 | MC |
| SRR7265377 | embryo | 1hA | 0.49 | MC |
| SRR7265378 | embryo | 1hA | 0.53 | MC |
| SRR7265381 | embryo | 1hN | 0.26 | MC |
| SRR7265382 | embryo | 3hA | 1.34 | MC |
| SRR7265383 | embryo | 3hA | 0.80 | MC |
| SRR7265384 | embryo | 3hA | 1.32 | MC |
| SRR7265385 | embryo | 3hN | 0.67 | MC |
| SRR7265386 | embryo | 3hN | 0.56 | MC |
| SRR7265387 | embryo | 3hN | 0.80 | MC |
| SRR7265393 | embryo | 12hN | 0.79 | MC |
| SRR7265398 | embryo | 24hN | 0.55 | MC |
| SRR2338866 | endosprem | control | 2.00 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.33 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.34 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.66 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.28 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.39 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.20 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.48 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.21 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.07 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.05 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.04 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.30 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.48 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.59 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.80 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.72 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.48 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 7.41 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.53 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.61 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.85 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.97 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.74 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.73 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.74 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.73 | MC |
| SRR1761528 | leaf | drought | 2.74 | MC |
| SRR1761529 | leaf | drought | 1.73 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.55 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.50 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.50 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.97 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.73 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.36 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.60 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.36 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.85 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.52 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.23 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.38 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.22 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.00 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.40 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.87 | MC |
| SRR6502088 | leaf | control | 0.34 | MC |
| SRR6502090 | leaf | control | 0.62 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.71 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 5.71 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 6.00 | MC |
| SRR6168973 | leaf | none (control) | 0.28 | MC |
| SRR6168974 | leaf | none (control) | 1.66 | MC |
| SRR6168975 | leaf | none (control) | 1.57 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.99 | MC |
| SRR6168981 | leaf | none (control) | 0.77 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.15 | MC |
| SRR1633185 | panicle | WT | 0.48 | MC |
| SRR5126147 | root | "mock,1_day" | 0.81 | MC |
| SRR5126148 | root | "mock,1_day" | 0.40 | MC |
| SRR5126149 | root | "mock,1_day" | 0.58 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.40 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.79 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.63 | MC |
| SRR5126155 | root | "mock,7_days" | 1.13 | MC |
| SRR5126157 | root | "mock,7_days" | 0.71 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.02 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.41 | MC |
| SRR5126165 | root | "mock,14_days" | 1.63 | MC |
| SRR5126167 | root | "mock,14_days" | 1.44 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.33 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.48 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.47 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.30 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.78 | MC |
| SRR1213694 | root | wt | 0.22 | MC |
| SRR2154086 | seedling | wt | 0.42 | MC |
| SRR2154083 | seedling | wt | 0.85 | MC |
| SRR2154085 | seedling | wt | 0.82 | MC |
| SRR2154087 | seedling | wt | 0.64 | MC |
| SRR3098741 | seedling | wt | 0.27 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.12 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 3.08 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.64 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.18 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.83 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.77 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.79 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.14 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.15 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.75 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.51 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.42 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.59 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.67 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.72 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.93 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.13 | MC |