| SRR5560727 | caryopsis | wild_type | 0.31 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.68 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.60 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.87 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.63 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.64 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.46 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.07 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.94 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.45 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.25 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.41 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.48 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.33 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.79 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.31 | MC |
| SRR1213693 | leaf | wt | 1.52 | MC |
| SRR8582890 | panicle | AM | 0.24 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.93 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.28 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.49 | MC |
| SRR5110448 | panicle | Dusk | 0.62 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.17 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.50 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.89 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.40 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.55 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.50 | MC |
| SRR5126165 | root | "mock,14_days" | 0.44 | MC |
| SRR1213695 | root | wt | 0.45 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.43 | MC |
| SRR6502106 | root | control | 0.38 | MC |
| SRR2154084 | seedling | wt | 0.56 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.36 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.27 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.08 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.30 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.68 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.91 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.33 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.50 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.81 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.58 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.30 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.71 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.74 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.15 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.36 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.65 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.41 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.46 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.65 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 2.47 | MC |