| SRR4457252 | 2nd_leaf | DAH12 | 0.41 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.74 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.34 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.30 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.96 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.43 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.62 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.59 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.65 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.94 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.51 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.19 | MC |
| SRR6320473 | carpel | wt | 1.32 | MC |
| SRR5560729 | caryopsis | wild_type | 0.47 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.76 | MC |
| SRR7265400 | coleoptile | 2dA | 3.74 | MC |
| SRR7265402 | coleoptile | 2dA | 3.77 | MC |
| SRR7265403 | coleoptile | 2dN | 2.34 | MC |
| SRR7265404 | coleoptile | 2dN | 1.34 | MC |
| SRR7265405 | coleoptile | 2dN | 1.73 | MC |
| SRR7265409 | coleoptile | 3dN | 2.52 | MC |
| SRR7265410 | coleoptile | 3dN | 1.83 | MC |
| SRR7265411 | coleoptile | 3dN | 1.58 | MC |
| SRR7265412 | coleoptile | 4dA | 3.27 | MC |
| SRR7265415 | coleoptile | 4dN | 3.52 | MC |
| SRR7265416 | coleoptile | 4dN | 3.10 | MC |
| SRR7265417 | coleoptile | 4dN | 2.27 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.29 | MC |
| SRR7265376 | embryo | 1hA | 2.95 | MC |
| SRR7265377 | embryo | 1hA | 2.94 | MC |
| SRR7265380 | embryo | 1hN | 2.79 | MC |
| SRR7265382 | embryo | 3hA | 1.87 | MC |
| SRR7265383 | embryo | 3hA | 2.69 | MC |
| SRR7265384 | embryo | 3hA | 2.19 | MC |
| SRR7265385 | embryo | 3hN | 2.38 | MC |
| SRR7265386 | embryo | 3hN | 2.43 | MC |
| SRR7265387 | embryo | 3hN | 2.51 | MC |
| SRR7265388 | embryo | 12hA | 2.44 | MC |
| SRR7265389 | embryo | 12hA | 3.06 | MC |
| SRR7265390 | embryo | 12hA | 2.14 | MC |
| SRR7265391 | embryo | 12hN | 1.68 | MC |
| SRR7265392 | embryo | 12hN | 2.09 | MC |
| SRR7265393 | embryo | 12hN | 1.71 | MC |
| SRR7265394 | embryo | 24hA | 3.36 | MC |
| SRR7265395 | embryo | 24hA | 3.80 | MC |
| SRR7265396 | embryo | 24hA | 3.83 | MC |
| SRR7265397 | embryo | 24hN | 2.16 | MC |
| SRR7265398 | embryo | 24hN | 1.89 | MC |
| SRR7265399 | embryo | 24hN | 2.08 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.41 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.50 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.33 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.41 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.06 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.37 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.08 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.34 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.77 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.41 | MC |
| SRR4457248 | flag_leaf | DAH44 | 3.62 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.34 | MC |
| SRR1213691 | flower | wt | 0.31 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.86 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.88 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.46 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.29 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.43 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.49 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.24 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.61 | MC |
| SRR504365 | leaf | wt | 0.50 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.44 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.56 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.42 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.30 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.62 | MC |
| SRR1213692 | leaf | wt | 0.92 | MC |
| SRR1213693 | leaf | wt | 0.40 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.51 | MC |
| SRR5856930 | leaf | salt | 0.31 | MC |
| SRR5856931 | leaf | salt | 0.32 | MC |
| SRR5856933 | leaf | control | 0.50 | MC |
| SRR5856935 | leaf | control | 0.39 | MC |
| SRR5856936 | leaf | salt | 0.15 | MC |
| SRR5856938 | leaf | salt | 0.26 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.56 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 1.30 | MC |
| SRR6168981 | leaf | none (control) | 0.26 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.49 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.23 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.27 | MC |
| SRR8582890 | panicle | AM | 0.23 | MC |
| SRR5110431 | panicle | Dawn | 0.50 | MC |
| SRR5110432 | panicle | Dawn | 0.84 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.83 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.63 | MC |
| SRR5110446 | panicle | Dusk | 0.55 | MC |
| SRR5110447 | panicle | Dusk | 0.59 | MC |
| SRR5110448 | panicle | Dusk | 1.04 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.61 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.97 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.46 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.53 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.86 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.99 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.82 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.62 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.80 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.03 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.80 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.76 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.38 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.24 | MC |
| SRR1633182 | panicle | WT | 0.85 | MC |
| SRR1633185 | panicle | WT | 1.06 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.81 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.07 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.62 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.05 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.79 | MC |
| SRR5126147 | root | "mock,1_day" | 0.43 | MC |
| SRR5126148 | root | "mock,1_day" | 0.48 | MC |
| SRR5126153 | root | "mock,7_days" | 0.79 | MC |
| SRR5126155 | root | "mock,7_days" | 0.68 | MC |
| SRR5126157 | root | "mock,7_days" | 0.61 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.62 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.68 | MC |
| SRR5126165 | root | "mock,14_days" | 1.05 | MC |
| SRR5126167 | root | "mock,14_days" | 0.77 | MC |
| SRR5126169 | root | "mock,14_days" | 0.60 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.41 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.88 | MC |
| SRR1213694 | root | wt | 0.48 | MC |
| SRR1213695 | root | wt | 0.57 | MC |
| SRR4947482 | root | Al | 0.44 | MC |
| SRR4947484 | root | Al | 1.00 | MC |
| SRR4947487 | root | control | 0.56 | MC |
| SRR4947492 | root | Al | 0.94 | MC |
| SRR4947497 | root | control | 0.93 | MC |
| SRR4947505 | root | control | 0.60 | MC |
| SRR4947509 | root | Al | 1.00 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.34 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.79 | MC |
| SRR6502094 | root | control | 0.63 | MC |
| SRR6502095 | root | control | 0.75 | MC |
| SRR6502096 | root | control | 0.42 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.55 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.69 | MC |
| SRR6502106 | root | control | 0.95 | MC |
| SRR6502107 | root | control | 1.73 | MC |
| SRR6502108 | root | control | 0.98 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.39 | MC |
| SRR2154082 | seedling | wt | 0.48 | MC |
| SRR2154083 | seedling | wt | 0.49 | MC |
| SRR3098742 | seedling | wt | 0.30 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.79 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.40 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.48 | MC |
| SRR358791 | seedling | wt | 0.86 | MC |
| SRR358792 | seedling | wt | 1.08 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.24 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.60 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.30 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.59 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.25 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.55 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.14 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.90 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.75 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.88 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.64 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.69 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.42 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.34 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.38 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.54 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.54 | MC |