| SRR4457250 | 2nd_leaf | DAH4 | 0.43 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.99 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.42 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.65 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.30 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.41 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.94 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.90 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.16 | MC |
| SRR3745127 | anther | wt | 0.60 | MC |
| SRR358797 | callus | wt | 1.04 | MC |
| SRR5560727 | caryopsis | wild_type | 0.23 | MC |
| SRR5560728 | caryopsis | wild_type | 0.37 | MC |
| SRR5560729 | caryopsis | wild_type | 0.51 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.51 | MC |
| SRR4947495 | root | control | 0.93 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.48 | MC |
| SRR7265400 | coleoptile | 2dA | 0.90 | MC |
| SRR7265401 | coleoptile | 2dA | 1.14 | MC |
| SRR7265402 | coleoptile | 2dA | 1.39 | MC |
| SRR7265403 | coleoptile | 2dN | 1.35 | MC |
| SRR7265404 | coleoptile | 2dN | 0.71 | MC |
| SRR7265405 | coleoptile | 2dN | 0.75 | MC |
| SRR7265406 | coleoptile | 3dA | 0.71 | MC |
| SRR7265407 | coleoptile | 3dA | 0.47 | MC |
| SRR7265408 | coleoptile | 3dA | 0.62 | MC |
| SRR7265409 | coleoptile | 3dN | 1.89 | MC |
| SRR7265410 | coleoptile | 3dN | 0.67 | MC |
| SRR7265411 | coleoptile | 3dN | 0.57 | MC |
| SRR7265413 | coleoptile | 4dA | 1.30 | MC |
| SRR7265415 | coleoptile | 4dN | 2.27 | MC |
| SRR7265416 | coleoptile | 4dN | 1.04 | MC |
| SRR7265417 | coleoptile | 4dN | 1.26 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.82 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.51 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.42 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.83 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.70 | MC |
| SRR7265377 | embryo | 1hA | 0.35 | MC |
| SRR7265378 | embryo | 1hA | 0.32 | MC |
| SRR7265379 | embryo | 1hN | 0.55 | MC |
| SRR7265381 | embryo | 1hN | 0.40 | MC |
| SRR7265382 | embryo | 3hA | 0.61 | MC |
| SRR7265384 | embryo | 3hA | 0.64 | MC |
| SRR7265385 | embryo | 3hN | 0.72 | MC |
| SRR7265386 | embryo | 3hN | 0.28 | MC |
| SRR7265387 | embryo | 3hN | 0.40 | MC |
| SRR7265388 | embryo | 12hA | 0.99 | MC |
| SRR7265389 | embryo | 12hA | 0.61 | MC |
| SRR7265390 | embryo | 12hA | 1.16 | MC |
| SRR7265391 | embryo | 12hN | 0.60 | MC |
| SRR7265393 | embryo | 12hN | 0.63 | MC |
| SRR7265394 | embryo | 24hA | 0.91 | MC |
| SRR7265395 | embryo | 24hA | 0.93 | MC |
| SRR7265396 | embryo | 24hA | 0.71 | MC |
| SRR7265397 | embryo | 24hN | 1.18 | MC |
| SRR7265398 | embryo | 24hN | 2.09 | MC |
| SRR7265399 | embryo | 24hN | 1.24 | MC |
| SRR2338867 | endosprem | control | 1.79 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.32 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.36 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.50 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.58 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.65 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.59 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.79 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.41 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.99 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.70 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.52 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.47 | MC |
| SRR1213691 | flower | wt | 0.62 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.38 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.45 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.44 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.66 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.78 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.39 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.27 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.81 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.02 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.18 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.57 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.64 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.30 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.38 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.83 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.83 | MC |
| SRR1761530 | leaf | control | 0.83 | MC |
| SRR504365 | leaf | wt | 1.15 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.26 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.29 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.21 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.39 | MC |
| SRR1213692 | leaf | wt | 0.35 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.48 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.66 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 3.23 | MC |
| SRR6168973 | leaf | none (control) | 0.31 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.75 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.36 | MC |
| SRR8582892 | panicle | PM | 0.73 | MC |
| SRR5110429 | panicle | Dawn | 0.50 | MC |
| SRR5110431 | panicle | Dawn | 0.92 | MC |
| SRR5110432 | panicle | Dawn | 0.92 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.40 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.75 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.87 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.34 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.57 | MC |
| SRR5110445 | panicle | Dusk | 0.45 | MC |
| SRR5110446 | panicle | Dusk | 0.40 | MC |
| SRR5110448 | panicle | Dusk | 0.71 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.30 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.60 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.45 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.90 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.55 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.56 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.42 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.55 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.32 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.80 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.60 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.01 | MC |
| SRR5126147 | root | "mock,1_day" | 0.60 | MC |
| SRR5126149 | root | "mock,1_day" | 0.50 | MC |
| SRR5126153 | root | "mock,7_days" | 0.81 | MC |
| SRR5126155 | root | "mock,7_days" | 0.49 | MC |
| SRR5126157 | root | "mock,7_days" | 0.50 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.63 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.39 | MC |
| SRR5126165 | root | "mock,14_days" | 0.70 | MC |
| SRR5126167 | root | "mock,14_days" | 0.31 | MC |
| SRR5126169 | root | "mock,14_days" | 0.72 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.89 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.22 | MC |
| SRR1213694 | root | wt | 0.34 | MC |
| SRR1213695 | root | wt | 0.14 | MC |
| SRR4947478 | root | control | 0.57 | MC |
| SRR4947479 | root | control | 0.49 | MC |
| SRR4947483 | root | Al | 0.54 | MC |
| SRR4947484 | root | Al | 0.79 | MC |
| SRR4947492 | root | Al | 0.87 | MC |
| SRR4947498 | root | Al | 0.97 | MC |
| SRR4947500 | root | Al | 0.73 | MC |
| SRR4947502 | root | control | 0.67 | MC |
| SRR4947503 | root | control | 0.72 | MC |
| SRR4947504 | root | control | 0.77 | MC |
| SRR4947507 | root | Al | 0.91 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.46 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.67 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.00 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.94 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.59 | MC |
| SRR2154086 | seedling | wt | 0.57 | MC |
| SRR2154083 | seedling | wt | 0.50 | MC |
| SRR2154084 | seedling | wt | 0.34 | MC |
| SRR2154085 | seedling | wt | 0.66 | MC |
| SRR2154087 | seedling | wt | 0.56 | MC |
| SRR3098741 | seedling | wt | 0.50 | MC |
| SRR3098742 | seedling | wt | 0.21 | MC |
| SRR3098743 | seedling | wt | 0.34 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.36 | MC |
| SRR1944583 | seedling | no_treatment | 0.68 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.41 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.42 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.46 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.29 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.52 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.91 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.63 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 0.77 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 1.00 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.52 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.56 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.84 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.79 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.58 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.61 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.02 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.26 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.97 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.15 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.97 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.50 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.53 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.34 | MC |