| SRR358795 | callus | wt | 1.08 | MC |
| SRR358796 | callus | wt | 1.12 | MC |
| SRR358797 | callus | wt | 1.62 | MC |
| SRR358798 | callus | wt | 1.30 | MC |
| SRR6320473 | carpel | wt | 3.23 | MC |
| SRR6320498 | carpel | wt | 2.93 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.76 | MC |
| SRR7265404 | coleoptile | 2dN | 0.52 | MC |
| SRR7265405 | coleoptile | 2dN | 0.62 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.30 | MC |
| SRR7265376 | embryo | 1hA | 1.19 | MC |
| SRR7265377 | embryo | 1hA | 1.39 | MC |
| SRR7265379 | embryo | 1hN | 0.44 | MC |
| SRR7265380 | embryo | 1hN | 0.63 | MC |
| SRR7265381 | embryo | 1hN | 0.36 | MC |
| SRR7265385 | embryo | 3hN | 1.96 | MC |
| SRR7265386 | embryo | 3hN | 2.49 | MC |
| SRR7265387 | embryo | 3hN | 1.40 | MC |
| SRR7265390 | embryo | 12hA | 0.96 | MC |
| SRR7265391 | embryo | 12hN | 3.77 | MC |
| SRR7265392 | embryo | 12hN | 4.27 | MC |
| SRR7265393 | embryo | 12hN | 3.66 | MC |
| SRR7265395 | embryo | 24hA | 0.52 | MC |
| SRR7265397 | embryo | 24hN | 1.22 | MC |
| SRR7265398 | embryo | 24hN | 3.59 | MC |
| SRR7265399 | embryo | 24hN | 2.27 | MC |
| SRR2338866 | endosprem | control | 2.03 | MC |
| SRR2338867 | endosprem | control | 0.88 | MC |
| SRR2338868 | endosprem | high_temperature | 0.50 | MC |
| SRR2338869 | endosprem | high_temperature | 2.06 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.28 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.41 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.34 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.58 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.38 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.45 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.45 | MC |
| SRR1761529 | leaf | drought | 0.45 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.24 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.42 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.24 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.39 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.30 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.30 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.28 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.23 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.07 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.70 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.86 | MC |
| SRR6502088 | leaf | control | 0.32 | MC |
| SRR6502090 | leaf | control | 0.37 | MC |
| SRR5856927 | leaf | control | 1.08 | MC |
| SRR5856928 | leaf | control | 0.68 | MC |
| SRR5856929 | leaf | control | 1.00 | MC |
| SRR5856930 | leaf | salt | 1.48 | MC |
| SRR5856931 | leaf | salt | 1.22 | MC |
| SRR5856932 | leaf | salt | 1.46 | MC |
| SRR5856933 | leaf | control | 0.74 | MC |
| SRR5856934 | leaf | control | 0.29 | MC |
| SRR5856935 | leaf | control | 0.69 | MC |
| SRR5856936 | leaf | salt | 1.32 | MC |
| SRR5856937 | leaf | salt | 1.64 | MC |
| SRR5856938 | leaf | salt | 1.43 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.56 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 4.18 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.23 | MC |
| SRR6168973 | leaf | none (control) | 0.37 | MC |
| SRR6168974 | leaf | none (control) | 0.94 | MC |
| SRR6168979 | leaf | none (control) | 0.22 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.61 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.74 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.68 | MC |
| SRR5110431 | panicle | Dawn | 1.73 | MC |
| SRR4947496 | root | control | 1.10 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.71 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.32 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.02 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.16 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.76 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.78 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.21 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 3.64 | MC |
| SRR5110445 | panicle | Dusk | 2.92 | MC |
| SRR5110446 | panicle | Dusk | 1.82 | MC |
| SRR5110447 | panicle | Dusk | 1.48 | MC |
| SRR5110448 | panicle | Dusk | 2.94 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.73 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.32 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.48 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.64 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.34 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.64 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.97 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.47 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.60 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.49 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.39 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.44 | MC |
| SRR5126155 | root | "mock,7_days" | 0.45 | MC |
| SRR5126167 | root | "mock,14_days" | 0.52 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.02 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.13 | MC |
| SRR4947480 | root | control | 1.21 | MC |
| SRR4947481 | root | control | 1.38 | MC |
| SRR4947484 | root | Al | 1.24 | MC |
| SRR4947485 | root | Al | 0.55 | MC |
| SRR4947488 | root | control | 0.55 | MC |
| SRR4947489 | root | control | 0.93 | MC |
| SRR4947491 | root | Al | 4.11 | MC |
| SRR4947493 | root | Al | 0.78 | MC |
| SRR4947497 | root | control | 0.55 | MC |
| SRR4947498 | root | Al | 4.77 | MC |
| SRR4947502 | root | control | 4.48 | MC |
| SRR4947504 | root | control | 1.37 | MC |
| SRR4947505 | root | control | 1.27 | MC |
| SRR4947507 | root | Al | 3.63 | MC |
| SRR4947508 | root | Al | 1.05 | MC |
| SRR4947509 | root | Al | 1.08 | MC |
| SRR2154083 | seedling | wt | 0.93 | MC |
| SRR3098741 | seedling | wt | 0.19 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.84 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.36 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.28 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.64 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.81 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.95 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.82 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.61 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.77 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.83 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.79 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.26 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.06 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.80 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.23 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.64 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.70 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.31 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.37 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.35 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.47 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.39 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.79 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.65 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.32 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.32 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.12 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.96 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.39 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.43 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.45 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.59 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.15 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.23 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.01 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.23 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.45 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 0.75 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.63 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.87 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.37 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.32 | MC |