| SRR4457249 | 2nd_leaf | DAH4 | 0.52 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.34 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.87 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.68 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.03 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.93 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.69 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.64 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.09 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.14 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.48 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.35 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.54 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.65 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 3.06 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.39 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.65 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.40 | MC |
| SRR976168 | flag_leaf | wild_type | 1.03 | MC |
| SRR4457231 | flag_leaf | DAH4 | 3.06 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.82 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.33 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.12 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.59 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.61 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.56 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.35 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.42 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.80 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.48 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.08 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.18 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.43 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.61 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.33 | MC |
| SRR8240826 | leaf | wild_type | 0.47 | MC |
| SRR8240818 | leaf | wild_type | 0.43 | MC |
| SRR8240819 | leaf | wild_type | 0.81 | MC |
| SRR8240820 | leaf | wild_type | 1.41 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.36 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.15 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.58 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.29 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.90 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.29 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.79 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.05 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.84 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.17 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.07 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.33 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.28 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.35 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.65 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.31 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.48 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 1.62 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.47 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.70 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.83 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.11 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.09 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.02 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.64 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.27 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.69 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.77 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.93 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.76 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.59 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.88 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.93 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 3.11 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.77 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 3.11 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.77 | MC |
| SRR1761530 | leaf | control | 3.11 | MC |
| SRR1761531 | leaf | control | 2.77 | MC |
| SRR504365 | leaf | wt | 0.80 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.80 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.99 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.81 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.39 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.36 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.04 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.29 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.25 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.14 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.55 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.47 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.55 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.30 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.47 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.49 | MC |
| SRR1213692 | leaf | wt | 0.98 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.62 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 3.41 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 2.88 | MC |
| SRR6502088 | leaf | control | 3.29 | MC |
| SRR6502090 | leaf | control | 3.70 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 4.19 | MC |
| SRR6502100 | leaf | control | 1.91 | MC |
| SRR6502101 | leaf | control | 2.10 | MC |
| SRR6502102 | leaf | control | 3.49 | MC |
| SRR6168979 | leaf | none (control) | 0.21 | MC |
| SRR8582891 | panicle | PM | 0.73 | MC |
| SRR8582892 | panicle | PM | 1.46 | MC |
| SRR8582893 | panicle | PM | 0.69 | MC |
| SRR5110430 | panicle | Dawn | 1.76 | MC |
| SRR5110431 | panicle | Dawn | 0.46 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.74 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.01 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.71 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.56 | MC |
| SRR1213695 | root | wt | 0.29 | MC |
| SRR6441554 | seedling | wild_type | 0.46 | MC |
| SRR6441555 | seedling | wild_type | 0.37 | MC |
| SRR2154086 | seedling | wt | 2.18 | MC |
| SRR2154083 | seedling | wt | 0.96 | MC |
| SRR2154084 | seedling | wt | 0.53 | MC |
| SRR3098741 | seedling | wt | 0.81 | MC |
| SRR3098742 | seedling | wt | 1.22 | MC |
| SRR3098743 | seedling | wt | 1.08 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.06 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.76 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.64 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.13 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.56 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.61 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.69 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.59 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.97 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.06 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.86 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.95 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.20 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.10 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.39 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.53 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.31 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.28 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.49 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.77 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.52 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.77 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.31 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.79 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.45 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.47 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.77 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.70 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.84 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.97 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.65 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.35 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.03 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.37 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.44 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.63 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.33 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.47 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.93 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.81 | MC |