| SRR4457251 | 2nd_leaf | DAH4 | 0.29 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.44 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.45 | MC |
| SRR3745125 | anther | wt | 6.04 | MC |
| SRR5560729 | caryopsis | wild_type | 0.40 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.52 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.70 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.40 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.29 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.42 | MC |
| SRR1213691 | flower | wt | 0.93 | MC |
| SRR8240824 | leaf | wild_type | 0.43 | MC |
| SRR8240825 | leaf | wild_type | 1.32 | MC |
| SRR8240826 | leaf | wild_type | 0.52 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.74 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.57 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.54 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.86 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.81 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.66 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.73 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.79 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.12 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.74 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.38 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.99 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.79 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.91 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.85 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.63 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.77 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.11 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.07 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.69 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.09 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.90 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.43 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.77 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.51 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.71 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.49 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.25 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.63 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.50 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.69 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.74 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.47 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.69 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.74 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.47 | MC |
| SRR1761528 | leaf | drought | 0.69 | MC |
| SRR1761529 | leaf | drought | 0.74 | MC |
| SRR1761531 | leaf | control | 0.47 | MC |
| SRR504365 | leaf | wt | 0.36 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.81 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.47 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.04 | MC |
| SRR6417967 | leaf | H2O_control | 0.54 | MC |
| SRR6417968 | leaf | H2O_control | 1.00 | MC |
| SRR6417969 | leaf | H2O_control | 1.06 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.26 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.53 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.28 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.69 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.85 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.52 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.27 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.50 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.36 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.12 | MC |
| SRR1213692 | leaf | wt | 0.57 | MC |
| SRR1213693 | leaf | wt | 1.30 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.53 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.93 | MC |
| SRR6502088 | leaf | control | 1.16 | MC |
| SRR6502089 | leaf | control | 0.80 | MC |
| SRR6502090 | leaf | control | 1.33 | MC |
| SRR6168973 | leaf | none (control) | 0.52 | MC |
| SRR8582888 | panicle | AM | 0.32 | MC |
| SRR8582889 | panicle | AM | 0.13 | MC |
| SRR8582891 | panicle | PM | 0.72 | MC |
| SRR8582893 | panicle | PM | 0.63 | MC |
| SRR5126147 | root | "mock,1_day" | 0.68 | MC |
| SRR5126148 | root | "mock,1_day" | 1.02 | MC |
| SRR5126149 | root | "mock,1_day" | 0.45 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.95 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.52 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.12 | MC |
| SRR5126153 | root | "mock,7_days" | 0.28 | MC |
| SRR5126155 | root | "mock,7_days" | 0.39 | MC |
| SRR5126165 | root | "mock,14_days" | 0.40 | MC |
| SRR5126167 | root | "mock,14_days" | 0.30 | MC |
| SRR5126169 | root | "mock,14_days" | 0.30 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.80 | MC |
| SRR1213695 | root | wt | 0.46 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.56 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.55 | MC |
| SRR6502095 | root | control | 0.42 | MC |
| SRR6441554 | seedling | wild_type | 0.89 | MC |
| SRR6441555 | seedling | wild_type | 1.15 | MC |
| SRR2154086 | seedling | wt | 0.47 | MC |
| SRR3098741 | seedling | wt | 0.53 | MC |
| SRR3098742 | seedling | wt | 0.62 | MC |
| SRR3098743 | seedling | wt | 0.37 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.24 | MC |
| SRR1944583 | seedling | no_treatment | 0.57 | MC |
| SRR358792 | seedling | wt | 0.60 | MC |
| SRR358794 | seedling | wt | 1.76 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.77 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.58 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.05 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.43 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.37 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.21 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.21 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.35 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.26 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.10 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.57 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.80 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.80 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.56 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.46 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.89 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.37 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.78 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.72 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.36 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.40 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.29 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.61 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.42 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.70 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.05 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.36 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.42 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.35 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.55 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.61 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.03 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.74 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.13 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.27 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 0.82 | MC |