| SRR4457249 | 2nd_leaf | DAH4 | 1.04 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.76 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.22 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.30 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.72 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.42 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.72 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.49 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.27 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.98 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.92 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.28 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.25 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.38 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.35 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.55 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.48 | MC |
| SRR6320473 | carpel | wt | 1.22 | MC |
| SRR5560727 | caryopsis | wild_type | 0.78 | MC |
| SRR5560728 | caryopsis | wild_type | 0.38 | MC |
| SRR5560729 | caryopsis | wild_type | 0.48 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.17 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.29 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.85 | MC |
| SRR7265404 | coleoptile | 2dN | 3.63 | MC |
| SRR7265405 | coleoptile | 2dN | 3.70 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.46 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.34 | MC |
| SRR7265378 | embryo | 1hA | 0.26 | MC |
| SRR7265381 | embryo | 1hN | 0.25 | MC |
| SRR7265391 | embryo | 12hN | 4.14 | MC |
| SRR7265392 | embryo | 12hN | 4.34 | MC |
| SRR7265393 | embryo | 12hN | 2.50 | MC |
| SRR7265397 | embryo | 24hN | 4.11 | MC |
| SRR7265398 | embryo | 24hN | 3.15 | MC |
| SRR7265399 | embryo | 24hN | 3.33 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.00 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.60 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.39 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.81 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.20 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.61 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.24 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.03 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.54 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.38 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.09 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.09 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.10 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.97 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.02 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.72 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.91 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.67 | MC |
| SRR8060836 | leaf | wild_type | 0.39 | MC |
| SRR8060837 | leaf | wild_type | 0.55 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.04 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.78 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.24 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.57 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.70 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.77 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.25 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.94 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.13 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.82 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.10 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.62 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.30 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.11 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.03 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.08 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.51 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.28 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.22 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.36 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.39 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.91 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.37 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.30 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.45 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.57 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.36 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.68 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.42 | MC |
| SRR504365 | leaf | wt | 2.56 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.30 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.85 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.97 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.00 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.50 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.62 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.42 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.30 | MC |
| SRR1213692 | leaf | wt | 0.42 | MC |
| SRR1213693 | leaf | wt | 0.45 | MC |
| SRR6502088 | leaf | control | 0.44 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.41 | MC |
| SRR6502101 | leaf | control | 0.34 | MC |
| SRR6502102 | leaf | control | 0.44 | MC |
| SRR5856929 | leaf | control | 0.21 | MC |
| SRR5856931 | leaf | salt | 0.33 | MC |
| SRR5856932 | leaf | salt | 0.18 | MC |
| SRR5856935 | leaf | control | 0.26 | MC |
| SRR5856936 | leaf | salt | 0.32 | MC |
| SRR5856937 | leaf | salt | 0.32 | MC |
| SRR5856938 | leaf | salt | 0.38 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 1.23 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.44 | MC |
| SRR8582888 | panicle | AM | 0.82 | MC |
| SRR8582889 | panicle | AM | 0.22 | MC |
| SRR8582890 | panicle | AM | 0.72 | MC |
| SRR8582891 | panicle | PM | 1.93 | MC |
| SRR8582892 | panicle | PM | 1.58 | MC |
| SRR8582893 | panicle | PM | 0.75 | MC |
| SRR5110429 | panicle | Dawn | 1.51 | MC |
| SRR5110430 | panicle | Dawn | 1.30 | MC |
| SRR5110431 | panicle | Dawn | 1.68 | MC |
| SRR5110432 | panicle | Dawn | 0.78 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.60 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.42 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.83 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.41 | MC |
| SRR5110440 | panicle | Dawn + 7h | 0.96 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.96 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.73 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.91 | MC |
| SRR5110445 | panicle | Dusk | 1.03 | MC |
| SRR5110446 | panicle | Dusk | 2.24 | MC |
| SRR5110447 | panicle | Dusk | 1.71 | MC |
| SRR5110448 | panicle | Dusk | 1.09 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.95 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.94 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.60 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.44 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.84 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.70 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.51 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.51 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.73 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.85 | MC |
| SRR5110460 | panicle | Dawn + 21h | 2.04 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.30 | MC |
| SRR5126155 | root | "mock,7_days" | 0.32 | MC |
| SRR5126157 | root | "mock,7_days" | 0.81 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.45 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.56 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.68 | MC |
| SRR1213695 | root | wt | 0.41 | MC |
| SRR4947481 | root | control | 0.71 | MC |
| SRR4947487 | root | control | 0.53 | MC |
| SRR2154082 | seedling | wt | 0.36 | MC |
| SRR2154083 | seedling | wt | 0.59 | MC |
| SRR2154084 | seedling | wt | 1.52 | MC |
| SRR2154085 | seedling | wt | 0.52 | MC |
| SRR2154087 | seedling | wt | 0.85 | MC |
| SRR3098741 | seedling | wt | 1.03 | MC |
| SRR3098742 | seedling | wt | 0.69 | MC |
| SRR3098743 | seedling | wt | 1.33 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.68 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.55 | MC |
| SRR1944583 | seedling | no_treatment | 0.55 | MC |
| SRR358791 | seedling | wt | 1.79 | MC |
| SRR358792 | seedling | wt | 1.92 | MC |
| SRR358793 | seedling | wt | 0.65 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.71 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.76 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.35 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.63 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.66 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.60 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.73 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.44 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.74 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.45 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.44 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.66 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.35 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.57 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.69 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.39 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.34 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.70 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.58 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.04 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.20 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.28 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.34 | MC |