| SRR4947495 | root | control | 1.71 | MC |
| SRR7265400 | coleoptile | 2dA | 0.84 | MC |
| SRR7265401 | coleoptile | 2dA | 0.38 | MC |
| SRR7265402 | coleoptile | 2dA | 0.33 | MC |
| SRR7265403 | coleoptile | 2dN | 0.36 | MC |
| SRR7265404 | coleoptile | 2dN | 0.38 | MC |
| SRR7265405 | coleoptile | 2dN | 0.42 | MC |
| SRR7265406 | coleoptile | 3dA | 1.66 | MC |
| SRR7265407 | coleoptile | 3dA | 1.74 | MC |
| SRR7265408 | coleoptile | 3dA | 0.83 | MC |
| SRR7265409 | coleoptile | 3dN | 0.36 | MC |
| SRR7265411 | coleoptile | 3dN | 0.58 | MC |
| SRR7265416 | coleoptile | 4dN | 0.54 | MC |
| SRR7265417 | coleoptile | 4dN | 0.56 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.46 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.74 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.64 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.54 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.16 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.45 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.66 | MC |
| SRR7265376 | embryo | 1hA | 1.75 | MC |
| SRR7265377 | embryo | 1hA | 1.53 | MC |
| SRR7265378 | embryo | 1hA | 2.07 | MC |
| SRR7265379 | embryo | 1hN | 2.17 | MC |
| SRR7265380 | embryo | 1hN | 1.37 | MC |
| SRR7265381 | embryo | 1hN | 1.68 | MC |
| SRR7265382 | embryo | 3hA | 1.03 | MC |
| SRR7265383 | embryo | 3hA | 1.19 | MC |
| SRR7265384 | embryo | 3hA | 1.12 | MC |
| SRR7265385 | embryo | 3hN | 1.14 | MC |
| SRR7265386 | embryo | 3hN | 1.14 | MC |
| SRR7265387 | embryo | 3hN | 1.04 | MC |
| SRR7265388 | embryo | 12hA | 1.64 | MC |
| SRR7265389 | embryo | 12hA | 1.81 | MC |
| SRR7265390 | embryo | 12hA | 1.70 | MC |
| SRR7265392 | embryo | 12hN | 0.50 | MC |
| SRR7265393 | embryo | 12hN | 0.42 | MC |
| SRR7265394 | embryo | 24hA | 0.64 | MC |
| SRR7265395 | embryo | 24hA | 0.72 | MC |
| SRR7265396 | embryo | 24hA | 0.56 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.57 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.19 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.92 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.85 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.43 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.84 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.18 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.67 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.68 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.29 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.13 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.57 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.48 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.24 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.35 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.55 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.40 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.63 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.45 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.03 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.55 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.56 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.73 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.97 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.01 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.06 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.44 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.85 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.21 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 1.29 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.48 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.87 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.61 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.26 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.95 | MC |
| SRR1761528 | leaf | drought | 1.13 | MC |
| SRR1761529 | leaf | drought | 1.56 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 2.09 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.15 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.28 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.26 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.91 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.42 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.49 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.29 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.27 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.38 | MC |
| SRR6502088 | leaf | control | 0.48 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.66 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.73 | MC |
| SRR5856927 | leaf | control | 0.60 | MC |
| SRR5856929 | leaf | control | 0.36 | MC |
| SRR5856930 | leaf | salt | 1.36 | MC |
| SRR5856931 | leaf | salt | 1.22 | MC |
| SRR5856932 | leaf | salt | 1.00 | MC |
| SRR5856933 | leaf | control | 0.44 | MC |
| SRR5856934 | leaf | control | 0.75 | MC |
| SRR5856935 | leaf | control | 0.80 | MC |
| SRR5856936 | leaf | salt | 1.16 | MC |
| SRR5856937 | leaf | salt | 1.25 | MC |
| SRR5856938 | leaf | salt | 0.60 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.37 | MC |
| SRR4947496 | root | control | 3.07 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.86 | MC |
| SRR5110437 | panicle | Dawn + 7h | 1.00 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.75 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.09 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.18 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.38 | MC |
| SRR5126147 | root | "mock,1_day" | 2.15 | MC |
| SRR5126148 | root | "mock,1_day" | 1.36 | MC |
| SRR5126149 | root | "mock,1_day" | 3.42 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.19 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.15 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.01 | MC |
| SRR5126153 | root | "mock,7_days" | 1.28 | MC |
| SRR5126155 | root | "mock,7_days" | 1.31 | MC |
| SRR5126157 | root | "mock,7_days" | 4.98 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.39 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.75 | MC |
| SRR5126165 | root | "mock,14_days" | 0.65 | MC |
| SRR5126167 | root | "mock,14_days" | 0.91 | MC |
| SRR5126169 | root | "mock,14_days" | 1.08 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.48 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.67 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.53 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.05 | MC |
| SRR1213694 | root | wt | 0.22 | MC |
| SRR1213695 | root | wt | 0.13 | MC |
| SRR4947479 | root | control | 1.27 | MC |
| SRR4947480 | root | control | 3.26 | MC |
| SRR4947481 | root | control | 5.64 | MC |
| SRR4947482 | root | Al | 0.63 | MC |
| SRR4947483 | root | Al | 1.07 | MC |
| SRR4947484 | root | Al | 3.08 | MC |
| SRR4947487 | root | control | 1.04 | MC |
| SRR4947488 | root | control | 4.07 | MC |
| SRR4947489 | root | control | 3.96 | MC |
| SRR4947490 | root | Al | 2.36 | MC |
| SRR4947491 | root | Al | 1.88 | MC |
| SRR4947492 | root | Al | 2.63 | MC |
| SRR4947493 | root | Al | 3.41 | MC |
| SRR4947494 | root | control | 1.33 | MC |
| SRR4947497 | root | control | 1.69 | MC |
| SRR4947498 | root | Al | 1.23 | MC |
| SRR4947499 | root | Al | 1.40 | MC |
| SRR4947500 | root | Al | 1.94 | MC |
| SRR4947501 | root | Al | 4.07 | MC |
| SRR4947502 | root | control | 0.84 | MC |
| SRR4947503 | root | control | 0.98 | MC |
| SRR4947504 | root | control | 3.32 | MC |
| SRR4947505 | root | control | 2.46 | MC |
| SRR4947506 | root | Al | 3.10 | MC |
| SRR4947507 | root | Al | 0.56 | MC |
| SRR4947508 | root | Al | 3.15 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.26 | MC |
| SRR6502092 | root | 100 mM NaCl | 1.01 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.53 | MC |
| SRR6502094 | root | control | 0.56 | MC |
| SRR6502095 | root | control | 0.49 | MC |
| SRR6502096 | root | control | 0.65 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.74 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.84 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.58 | MC |
| SRR6502106 | root | control | 1.22 | MC |
| SRR6502107 | root | control | 0.96 | MC |
| SRR6502108 | root | control | 1.04 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.25 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.66 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.60 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.01 | MC |
| SRR1740432 | root_elongation_zone | wt | 3.00 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.53 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.56 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.53 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.09 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.22 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.83 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.22 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.62 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.26 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.50 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.12 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.14 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.32 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.44 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.74 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.34 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.92 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.50 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.28 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.60 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.13 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.26 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.39 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.64 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.43 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.64 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.06 | MC |