| SRR4457249 | 2nd_leaf | DAH4 | 1.21 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.15 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.86 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.25 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.95 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.23 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.07 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.52 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.92 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.75 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.33 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.58 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.76 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.56 | MC |
| SRR3745126 | anther | wt | 1.77 | MC |
| SRR358795 | callus | wt | 2.61 | MC |
| SRR358798 | callus | wt | 2.38 | MC |
| SRR7265400 | coleoptile | 2dA | 0.58 | MC |
| SRR7265402 | coleoptile | 2dA | 0.48 | MC |
| SRR7265403 | coleoptile | 2dN | 1.22 | MC |
| SRR7265404 | coleoptile | 2dN | 0.94 | MC |
| SRR7265405 | coleoptile | 2dN | 1.09 | MC |
| SRR7265407 | coleoptile | 3dA | 0.23 | MC |
| SRR7265409 | coleoptile | 3dN | 0.75 | MC |
| SRR7265410 | coleoptile | 3dN | 0.53 | MC |
| SRR7265411 | coleoptile | 3dN | 0.51 | MC |
| SRR7265413 | coleoptile | 4dA | 0.86 | MC |
| SRR7265414 | coleoptile | 4dA | 0.66 | MC |
| SRR7265415 | coleoptile | 4dN | 0.94 | MC |
| SRR7265416 | coleoptile | 4dN | 0.48 | MC |
| SRR7265417 | coleoptile | 4dN | 0.87 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.54 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.76 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.58 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.49 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.69 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.44 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.56 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.72 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.63 | MC |
| SRR7265376 | embryo | 1hA | 1.39 | MC |
| SRR7265377 | embryo | 1hA | 0.60 | MC |
| SRR7265378 | embryo | 1hA | 1.04 | MC |
| SRR7265379 | embryo | 1hN | 0.80 | MC |
| SRR7265380 | embryo | 1hN | 0.96 | MC |
| SRR7265381 | embryo | 1hN | 1.20 | MC |
| SRR7265382 | embryo | 3hA | 1.75 | MC |
| SRR7265383 | embryo | 3hA | 1.38 | MC |
| SRR7265384 | embryo | 3hA | 2.17 | MC |
| SRR7265385 | embryo | 3hN | 1.19 | MC |
| SRR7265386 | embryo | 3hN | 0.94 | MC |
| SRR7265387 | embryo | 3hN | 0.87 | MC |
| SRR7265388 | embryo | 12hA | 1.65 | MC |
| SRR7265389 | embryo | 12hA | 0.96 | MC |
| SRR7265390 | embryo | 12hA | 1.14 | MC |
| SRR7265391 | embryo | 12hN | 1.72 | MC |
| SRR7265392 | embryo | 12hN | 1.89 | MC |
| SRR7265393 | embryo | 12hN | 1.53 | MC |
| SRR7265394 | embryo | 24hA | 1.02 | MC |
| SRR7265395 | embryo | 24hA | 1.44 | MC |
| SRR7265396 | embryo | 24hA | 1.10 | MC |
| SRR7265397 | embryo | 24hN | 1.44 | MC |
| SRR7265398 | embryo | 24hN | 1.71 | MC |
| SRR7265399 | embryo | 24hN | 1.43 | MC |
| SRR2338868 | endosprem | high_temperature | 0.54 | MC |
| SRR976168 | flag_leaf | wild_type | 0.71 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.98 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.90 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.27 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.66 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.18 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.40 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.77 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.74 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.69 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.54 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.96 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.61 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.14 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.85 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.83 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.61 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.07 | MC |
| SRR8060836 | leaf | wild_type | 0.29 | MC |
| SRR8060837 | leaf | wild_type | 0.20 | MC |
| SRR8240824 | leaf | wild_type | 0.24 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.36 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.46 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.34 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.11 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.37 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.27 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.24 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.57 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.46 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.42 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.07 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.42 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.23 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.35 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.02 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.28 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.36 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.78 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.82 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.48 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.78 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.82 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.48 | MC |
| SRR1761528 | leaf | drought | 1.78 | MC |
| SRR1761530 | leaf | control | 1.82 | MC |
| SRR1761531 | leaf | control | 1.48 | MC |
| SRR504365 | leaf | wt | 1.71 | MC |
| SRR6417967 | leaf | H2O_control | 0.81 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.23 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.81 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.23 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.35 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.38 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.72 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.61 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.32 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.73 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.23 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.02 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.01 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.37 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.26 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.34 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.36 | MC |
| SRR1213692 | leaf | wt | 0.79 | MC |
| SRR1213693 | leaf | wt | 0.45 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.12 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.26 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.10 | MC |
| SRR6502090 | leaf | control | 0.76 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.95 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.95 | MC |
| SRR6502100 | leaf | control | 0.68 | MC |
| SRR6502101 | leaf | control | 1.14 | MC |
| SRR6502102 | leaf | control | 0.65 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.46 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.24 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.02 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 1.87 | MC |
| SRR8582890 | panicle | AM | 0.27 | MC |
| SRR5110429 | panicle | Dawn | 0.89 | MC |
| SRR5110430 | panicle | Dawn | 1.78 | MC |
| SRR5110431 | panicle | Dawn | 0.78 | MC |
| SRR5110432 | panicle | Dawn | 0.71 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.77 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.45 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.86 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.25 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.53 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.59 | MC |
| SRR5110445 | panicle | Dusk | 0.48 | MC |
| SRR5110446 | panicle | Dusk | 0.66 | MC |
| SRR5110447 | panicle | Dusk | 0.65 | MC |
| SRR5110448 | panicle | Dusk | 0.56 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.80 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.12 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.65 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.71 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.54 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.67 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.51 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.43 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.49 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.55 | MC |
| SRR1633182 | panicle | WT | 3.54 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.43 | MC |
| SRR1213695 | root | wt | 0.92 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.95 | MC |
| SRR6502092 | root | 100 mM NaCl | 1.70 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.43 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.93 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.72 | MC |
| SRR6502106 | root | control | 1.63 | MC |
| SRR6502107 | root | control | 1.70 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.42 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.52 | MC |
| SRR6441555 | seedling | wild_type | 0.34 | MC |
| SRR2154086 | seedling | wt | 0.71 | MC |
| SRR2154082 | seedling | wt | 0.33 | MC |
| SRR2154083 | seedling | wt | 0.29 | MC |
| SRR2154084 | seedling | wt | 0.74 | MC |
| SRR2154085 | seedling | wt | 0.55 | MC |
| SRR2154087 | seedling | wt | 0.54 | MC |
| SRR3098741 | seedling | wt | 0.17 | MC |
| SRR3098743 | seedling | wt | 0.15 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.69 | MC |
| SRR1944583 | seedling | no_treatment | 1.97 | MC |
| SRR358794 | seedling | wt | 3.07 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.84 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.77 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.60 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.12 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.08 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.88 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.70 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.99 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.65 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.67 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.99 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.66 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.39 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.81 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.42 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.52 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.70 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.62 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.06 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.35 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.76 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.36 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.86 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.77 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.99 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.15 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.58 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.48 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.55 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.45 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.16 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 0.98 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.23 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.69 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.47 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.61 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.62 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.35 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.44 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.13 | MC |