| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.53 | MC |
| SRR7265400 | coleoptile | 2dA | 0.63 | MC |
| SRR7265414 | coleoptile | 4dA | 0.50 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.36 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.46 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.33 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.23 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.41 | MC |
| SRR7265379 | embryo | 1hN | 0.40 | MC |
| SRR7265388 | embryo | 12hA | 0.43 | MC |
| SRR7265395 | embryo | 24hA | 0.49 | MC |
| SRR8240819 | leaf | wild_type | 0.20 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.36 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.83 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.82 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.21 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.35 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.79 | MC |
| SRR6502088 | leaf | control | 0.45 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.52 | MC |
| SRR5856928 | leaf | control | 0.36 | MC |
| SRR5856934 | leaf | control | 0.41 | MC |
| SRR5856935 | leaf | control | 0.24 | MC |
| SRR5856938 | leaf | salt | 0.15 | MC |
| SRR4947496 | root | control | 0.84 | MC |
| SRR1633182 | panicle | WT | 3.93 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.22 | MC |
| SRR5126147 | root | "mock,1_day" | 0.36 | MC |
| SRR5126149 | root | "mock,1_day" | 1.08 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.94 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.26 | MC |
| SRR5126153 | root | "mock,7_days" | 0.83 | MC |
| SRR5126155 | root | "mock,7_days" | 0.56 | MC |
| SRR5126157 | root | "mock,7_days" | 0.90 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.31 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.19 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.95 | MC |
| SRR5126165 | root | "mock,14_days" | 1.11 | MC |
| SRR5126167 | root | "mock,14_days" | 1.08 | MC |
| SRR5126169 | root | "mock,14_days" | 0.97 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.39 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.45 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.40 | MC |
| SRR1213694 | root | wt | 0.44 | MC |
| SRR4947478 | root | control | 0.73 | MC |
| SRR4947480 | root | control | 1.23 | MC |
| SRR4947481 | root | control | 0.81 | MC |
| SRR4947484 | root | Al | 1.51 | MC |
| SRR4947487 | root | control | 1.05 | MC |
| SRR4947488 | root | control | 2.96 | MC |
| SRR4947489 | root | control | 1.61 | MC |
| SRR4947492 | root | Al | 0.82 | MC |
| SRR4947493 | root | Al | 1.04 | MC |
| SRR4947494 | root | control | 0.63 | MC |
| SRR4947497 | root | control | 0.95 | MC |
| SRR4947498 | root | Al | 0.89 | MC |
| SRR4947500 | root | Al | 0.85 | MC |
| SRR4947502 | root | control | 0.67 | MC |
| SRR4947504 | root | control | 2.26 | MC |
| SRR4947505 | root | control | 2.03 | MC |
| SRR4947508 | root | Al | 0.61 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.93 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.15 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.78 | MC |
| SRR6502094 | root | control | 0.70 | MC |
| SRR6502095 | root | control | 1.04 | MC |
| SRR6502096 | root | control | 0.93 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.02 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.42 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.36 | MC |
| SRR6502106 | root | control | 1.00 | MC |
| SRR6502107 | root | control | 0.98 | MC |
| SRR6502108 | root | control | 1.22 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.34 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.58 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.72 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.38 | MC |
| SRR2154085 | seedling | wt | 0.52 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.63 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.62 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.22 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.86 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.35 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.59 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.27 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.57 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.94 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.27 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.97 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.54 | MC |