| SRR4457249 | 2nd_leaf | DAH4 | 1.37 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.49 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.95 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.45 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.08 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.67 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.36 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.21 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.40 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.61 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.34 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.45 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.47 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.59 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 4.23 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.88 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.49 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.59 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.29 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.04 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.71 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.52 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.72 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.47 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.78 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.59 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.54 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.21 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.43 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.84 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.34 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.23 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.78 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.06 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.48 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.30 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.18 | MC |
| SRR8060837 | leaf | wild_type | 0.39 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.75 | MC |
| SRR5856927 | leaf | control | 1.32 | MC |
| SRR5856928 | leaf | control | 1.29 | MC |
| SRR5856929 | leaf | control | 1.67 | MC |
| SRR5856930 | leaf | salt | 0.87 | MC |
| SRR5856931 | leaf | salt | 0.72 | MC |
| SRR5856932 | leaf | salt | 0.75 | MC |
| SRR5856933 | leaf | control | 0.83 | MC |
| SRR5856934 | leaf | control | 0.59 | MC |
| SRR5856935 | leaf | control | 0.98 | MC |
| SRR5856936 | leaf | salt | 1.04 | MC |
| SRR5856937 | leaf | salt | 1.03 | MC |
| SRR5856938 | leaf | salt | 0.50 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.87 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 7.03 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 5.60 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 3.31 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 1.56 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.55 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.61 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.98 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.55 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.95 | MC |
| SRR5110429 | panicle | Dawn | 3.08 | MC |
| SRR5110430 | panicle | Dawn | 3.18 | MC |
| SRR5110431 | panicle | Dawn | 1.69 | MC |
| SRR5110432 | panicle | Dawn | 2.06 | MC |
| SRR4947496 | root | control | 3.59 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.46 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.12 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.86 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.13 | MC |
| SRR5110437 | panicle | Dawn + 7h | 3.02 | MC |
| SRR5110438 | panicle | Dawn + 7h | 3.98 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.82 | MC |
| SRR5110440 | panicle | Dawn + 7h | 2.08 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.17 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 2.64 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 3.74 | MC |
| SRR5110445 | panicle | Dusk | 1.97 | MC |
| SRR5110446 | panicle | Dusk | 1.21 | MC |
| SRR5110447 | panicle | Dusk | 2.43 | MC |
| SRR5110448 | panicle | Dusk | 1.14 | MC |
| SRR5110449 | panicle | Dawn + 14h | 2.77 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.66 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.91 | MC |
| SRR5110452 | panicle | Dawn + 14h | 2.65 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.78 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.64 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.91 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.53 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.48 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.03 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.08 | MC |
| SRR5110460 | panicle | Dawn + 21h | 2.27 | MC |
| SRR4947478 | root | control | 3.68 | MC |
| SRR4947479 | root | control | 2.22 | MC |
| SRR4947480 | root | control | 1.71 | MC |
| SRR4947481 | root | control | 1.29 | MC |
| SRR4947482 | root | Al | 3.34 | MC |
| SRR4947483 | root | Al | 2.37 | MC |
| SRR4947484 | root | Al | 3.11 | MC |
| SRR4947485 | root | Al | 1.50 | MC |
| SRR4947487 | root | control | 3.15 | MC |
| SRR4947488 | root | control | 1.67 | MC |
| SRR4947489 | root | control | 1.64 | MC |
| SRR4947490 | root | Al | 1.44 | MC |
| SRR4947491 | root | Al | 1.86 | MC |
| SRR4947492 | root | Al | 1.29 | MC |
| SRR4947493 | root | Al | 0.79 | MC |
| SRR4947499 | root | Al | 2.97 | MC |
| SRR4947500 | root | Al | 1.48 | MC |
| SRR4947501 | root | Al | 5.39 | MC |
| SRR4947502 | root | control | 3.62 | MC |
| SRR4947503 | root | control | 3.03 | MC |
| SRR4947504 | root | control | 3.54 | MC |
| SRR4947506 | root | Al | 2.12 | MC |
| SRR4947508 | root | Al | 3.39 | MC |
| SRR4947509 | root | Al | 2.28 | MC |
| SRR1740434 | root_differentiation_zone | wt | 3.42 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.65 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.45 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.33 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.10 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.64 | MC |
| SRR2154082 | seedling | wt | 0.56 | MC |
| SRR2154083 | seedling | wt | 1.49 | MC |
| SRR2154084 | seedling | wt | 1.08 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.82 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.65 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.24 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.04 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.60 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.02 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 0.91 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.97 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.30 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.79 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.56 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.63 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.32 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.30 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.98 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.35 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.53 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.09 | MC |