| SRR4457249 | 2nd_leaf | DAH4 | 3.63 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 3.71 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 3.09 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.78 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.03 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.27 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.84 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.56 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.89 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.25 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.10 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.33 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.55 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.31 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.75 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.92 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.28 | MC |
| SRR3745125 | anther | wt | 0.71 | MC |
| SRR3745126 | anther | wt | 0.64 | MC |
| SRR3745127 | anther | wt | 0.84 | MC |
| SRR358795 | callus | wt | 1.30 | MC |
| SRR358796 | callus | wt | 1.75 | MC |
| SRR358797 | callus | wt | 1.31 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.82 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.70 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.34 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.69 | MC |
| SRR7265400 | coleoptile | 2dA | 0.43 | MC |
| SRR7265401 | coleoptile | 2dA | 0.30 | MC |
| SRR7265404 | coleoptile | 2dN | 0.35 | MC |
| SRR7265407 | coleoptile | 3dA | 0.24 | MC |
| SRR7265410 | coleoptile | 3dN | 0.67 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.61 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.63 | MC |
| SRR2338867 | endosprem | control | 1.60 | MC |
| SRR2338869 | endosprem | high_temperature | 1.37 | MC |
| SRR976168 | flag_leaf | wild_type | 2.81 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.48 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.88 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.79 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.47 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.69 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.18 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.16 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.85 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.38 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.41 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.74 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.52 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.57 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.81 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.63 | MC |
| SRR4457248 | flag_leaf | DAH44 | 0.96 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.25 | MC |
| SRR1213691 | flower | wt | 2.84 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.24 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.66 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.26 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.17 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.25 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.20 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 6.38 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.19 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.64 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.98 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.71 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.02 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.96 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.39 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.68 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 5.92 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.02 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 5.00 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 4.73 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.96 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.02 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 5.00 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 4.73 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.96 | MC |
| SRR1761528 | leaf | drought | 4.02 | MC |
| SRR1761529 | leaf | drought | 5.00 | MC |
| SRR1761530 | leaf | control | 4.73 | MC |
| SRR1761531 | leaf | control | 2.96 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.95 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.72 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.30 | MC |
| SRR6417967 | leaf | H2O_control | 3.64 | MC |
| SRR6417968 | leaf | H2O_control | 3.20 | MC |
| SRR6417969 | leaf | H2O_control | 2.08 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.57 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.87 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.98 | MC |
| SRR1633185 | panicle | WT | 0.40 | MC |
| SRR5126147 | root | "mock,1_day" | 2.29 | MC |
| SRR5126148 | root | "mock,1_day" | 1.67 | MC |
| SRR5126149 | root | "mock,1_day" | 2.67 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.59 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.79 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.82 | MC |
| SRR5126153 | root | "mock,7_days" | 1.72 | MC |
| SRR5126155 | root | "mock,7_days" | 3.11 | MC |
| SRR5126157 | root | "mock,7_days" | 5.23 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.05 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.71 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.69 | MC |
| SRR5126165 | root | "mock,14_days" | 1.00 | MC |
| SRR5126167 | root | "mock,14_days" | 0.94 | MC |
| SRR5126169 | root | "mock,14_days" | 3.65 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.47 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.83 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.80 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.96 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.00 | MC |
| SRR1213694 | root | wt | 0.41 | MC |
| SRR6502103 | root | 100 mM NaCl | 2.03 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.20 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.63 | MC |
| SRR6502106 | root | control | 3.93 | MC |
| SRR6502107 | root | control | 1.72 | MC |
| SRR6502108 | root | control | 1.46 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.30 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.42 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.57 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.79 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.57 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.63 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.15 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.26 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.08 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.34 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.53 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 3.27 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.62 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 0.77 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.47 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.72 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.23 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.44 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.12 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.10 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.09 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 2.31 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.39 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.41 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 1.60 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.65 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.94 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 0.98 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.78 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.22 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 5.47 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.01 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.13 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.92 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.42 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 4.58 | MC |