| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.74 | MC |
| SRR7265401 | coleoptile | 2dA | 0.32 | MC |
| SRR7265402 | coleoptile | 2dA | 0.60 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.60 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.32 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.45 | MC |
| SRR7265388 | embryo | 12hA | 0.49 | MC |
| SRR1213691 | flower | wt | 0.87 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.19 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.49 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.76 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.53 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.81 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.37 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.39 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.32 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.29 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.29 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.30 | MC |
| SRR6168973 | leaf | none (control) | 0.66 | MC |
| SRR6168974 | leaf | none (control) | 1.12 | MC |
| SRR6168981 | leaf | none (control) | 0.30 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.39 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.54 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.06 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.11 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 3.92 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.96 | MC |
| SRR5126147 | root | "mock,1_day" | 0.38 | MC |
| SRR5126148 | root | "mock,1_day" | 0.29 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.47 | MC |
| SRR5126153 | root | "mock,7_days" | 0.33 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.61 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.60 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.64 | MC |
| SRR5126167 | root | "mock,14_days" | 0.37 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.68 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.34 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.54 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.43 | MC |
| SRR6502107 | root | control | 0.28 | MC |
| SRR6502108 | root | control | 0.48 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.45 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.36 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.76 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.21 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.64 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.51 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.39 | MC |
| SRR2154083 | seedling | wt | 0.61 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.13 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.29 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.96 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.98 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.96 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.27 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.59 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.54 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.99 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.86 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.10 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.32 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.32 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 0.85 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.63 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 0.75 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.95 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.33 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.93 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.73 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.05 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.84 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.74 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.00 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.08 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 1.86 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.15 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 3.03 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.48 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 0.93 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.43 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 0.87 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.92 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.26 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.21 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.28 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.69 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 2.63 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.30 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 2.86 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.91 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.39 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.36 | MC |