| SRR4457249 | 2nd_leaf | DAH4 | 0.75 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.51 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.31 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.94 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.56 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.91 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.44 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.76 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.00 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.12 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.21 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.04 | MC |
| SRR3745125 | anther | wt | 2.22 | MC |
| SRR3745126 | anther | wt | 3.83 | MC |
| SRR3745127 | anther | wt | 1.83 | MC |
| SRR358795 | callus | wt | 4.56 | MC |
| SRR358796 | callus | wt | 8.85 | MC |
| SRR358797 | callus | wt | 6.55 | MC |
| SRR358798 | callus | wt | 7.88 | MC |
| SRR5560728 | caryopsis | wild_type | 4.20 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 2.73 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.26 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.80 | MC |
| SRR7265400 | coleoptile | 2dA | 2.43 | MC |
| SRR7265401 | coleoptile | 2dA | 2.96 | MC |
| SRR7265402 | coleoptile | 2dA | 3.22 | MC |
| SRR7265406 | coleoptile | 3dA | 2.22 | MC |
| SRR7265407 | coleoptile | 3dA | 2.74 | MC |
| SRR7265408 | coleoptile | 3dA | 2.59 | MC |
| SRR7265409 | coleoptile | 3dN | 4.05 | MC |
| SRR7265411 | coleoptile | 3dN | 3.56 | MC |
| SRR7265412 | coleoptile | 4dA | 1.67 | MC |
| SRR7265413 | coleoptile | 4dA | 1.97 | MC |
| SRR7265414 | coleoptile | 4dA | 1.90 | MC |
| SRR7265415 | coleoptile | 4dN | 3.58 | MC |
| SRR7265417 | coleoptile | 4dN | 3.50 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.52 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.90 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.66 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.27 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.91 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.63 | MC |
| SRR7265376 | embryo | 1hA | 0.45 | MC |
| SRR7265377 | embryo | 1hA | 1.85 | MC |
| SRR7265378 | embryo | 1hA | 0.76 | MC |
| SRR7265379 | embryo | 1hN | 1.23 | MC |
| SRR7265380 | embryo | 1hN | 1.97 | MC |
| SRR7265381 | embryo | 1hN | 1.50 | MC |
| SRR7265382 | embryo | 3hA | 1.93 | MC |
| SRR7265383 | embryo | 3hA | 0.71 | MC |
| SRR7265384 | embryo | 3hA | 0.96 | MC |
| SRR7265385 | embryo | 3hN | 1.07 | MC |
| SRR7265386 | embryo | 3hN | 0.75 | MC |
| SRR7265387 | embryo | 3hN | 1.46 | MC |
| SRR7265388 | embryo | 12hA | 3.82 | MC |
| SRR7265389 | embryo | 12hA | 4.47 | MC |
| SRR7265392 | embryo | 12hN | 3.17 | MC |
| SRR7265393 | embryo | 12hN | 2.38 | MC |
| SRR7265394 | embryo | 24hA | 3.79 | MC |
| SRR7265395 | embryo | 24hA | 3.37 | MC |
| SRR2338867 | endosprem | control | 1.20 | MC |
| SRR2338869 | endosprem | high_temperature | 1.25 | MC |
| SRR976168 | flag_leaf | wild_type | 0.78 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.37 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.31 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.20 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.22 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.60 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.38 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.60 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.32 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.98 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.36 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.73 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.50 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.78 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.68 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.73 | MC |
| SRR1213691 | flower | wt | 3.22 | MC |
| SRR8240824 | leaf | wild_type | 0.81 | MC |
| SRR8240825 | leaf | wild_type | 0.32 | MC |
| SRR8240818 | leaf | wild_type | 0.60 | MC |
| SRR8240819 | leaf | wild_type | 0.23 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.85 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.02 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.73 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.25 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.98 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.97 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.31 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.65 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.98 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.97 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.49 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.02 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.75 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.11 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.64 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.49 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.39 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.32 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.08 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.53 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.33 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.05 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.00 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.28 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.61 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.51 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.65 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.19 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.11 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.32 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.85 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.75 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.80 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.69 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.65 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.42 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.17 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.80 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.67 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.42 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.17 | MC |
| SRR1761528 | leaf | drought | 1.75 | MC |
| SRR1761529 | leaf | drought | 2.71 | MC |
| SRR1761530 | leaf | control | 2.40 | MC |
| SRR1761531 | leaf | control | 1.17 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.81 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.85 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.85 | MC |
| SRR6417967 | leaf | H2O_control | 0.80 | MC |
| SRR6417968 | leaf | H2O_control | 1.55 | MC |
| SRR6417969 | leaf | H2O_control | 0.72 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.25 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.85 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.97 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 4.16 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.73 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.69 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 3.46 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.58 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.61 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 3.31 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.78 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.77 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.60 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.48 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.95 | MC |
| SRR1213692 | leaf | wt | 2.96 | MC |
| SRR1213693 | leaf | wt | 1.17 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 3.32 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 3.38 | MC |
| SRR6502088 | leaf | control | 3.94 | MC |
| SRR6502089 | leaf | control | 3.00 | MC |
| SRR6502090 | leaf | control | 2.67 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.22 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 3.00 | MC |
| SRR6502100 | leaf | control | 1.04 | MC |
| SRR6502101 | leaf | control | 4.04 | MC |
| SRR6168979 | leaf | none (control) | 0.69 | MC |
| SRR6168980 | leaf | none (control) | 0.38 | MC |
| SRR8582889 | panicle | AM | 0.28 | MC |
| SRR8582890 | panicle | AM | 0.39 | MC |
| SRR8582891 | panicle | PM | 4.43 | MC |
| SRR8582892 | panicle | PM | 2.96 | MC |
| SRR8582893 | panicle | PM | 4.67 | MC |
| SRR4947496 | root | control | 4.40 | MC |
| SRR5110445 | panicle | Dusk | 0.60 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.97 | MC |
| SRR1633182 | panicle | WT | 3.88 | MC |
| SRR1633185 | panicle | WT | 5.76 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.63 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.58 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.09 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.83 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 3.29 | MC |
| SRR5126149 | root | "mock,1_day" | 2.15 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 3.61 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.89 | MC |
| SRR5126157 | root | "mock,7_days" | 2.21 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.64 | MC |
| SRR5126165 | root | "mock,14_days" | 2.14 | MC |
| SRR5126167 | root | "mock,14_days" | 3.48 | MC |
| SRR5126169 | root | "mock,14_days" | 4.28 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.99 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.18 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 3.72 | MC |
| SRR1213694 | root | wt | 1.24 | MC |
| SRR1213695 | root | wt | 1.09 | MC |
| SRR4947480 | root | control | 4.71 | MC |
| SRR4947481 | root | control | 3.76 | MC |
| SRR4947484 | root | Al | 3.80 | MC |
| SRR4947485 | root | Al | 3.15 | MC |
| SRR4947488 | root | control | 3.41 | MC |
| SRR4947489 | root | control | 4.22 | MC |
| SRR4947498 | root | Al | 0.57 | MC |
| SRR4947504 | root | control | 3.15 | MC |
| SRR4947505 | root | control | 4.35 | MC |
| SRR4947508 | root | Al | 3.61 | MC |
| SRR4947509 | root | Al | 5.06 | MC |
| SRR6502094 | root | control | 4.01 | MC |
| SRR6502108 | root | control | 4.57 | MC |
| SRR6441554 | seedling | wild_type | 1.39 | MC |
| SRR6441555 | seedling | wild_type | 2.55 | MC |
| SRR2154086 | seedling | wt | 4.15 | MC |
| SRR2154085 | seedling | wt | 2.07 | MC |
| SRR2154087 | seedling | wt | 1.59 | MC |
| SRR3098741 | seedling | wt | 1.67 | MC |
| SRR3098742 | seedling | wt | 1.90 | MC |
| SRR3098743 | seedling | wt | 1.58 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.12 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.86 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.53 | MC |
| SRR1944583 | seedling | no_treatment | 2.17 | MC |
| SRR358791 | seedling | wt | 3.57 | MC |
| SRR358792 | seedling | wt | 3.20 | MC |
| SRR358793 | seedling | wt | 5.02 | MC |
| SRR358794 | seedling | wt | 4.62 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.31 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.84 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.61 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.09 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.02 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.40 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.63 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.38 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.47 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.79 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.16 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.36 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.04 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.91 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.98 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.37 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.24 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.53 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.90 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.70 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.94 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.55 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.86 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.68 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.24 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.76 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.48 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.26 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.49 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.21 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 5.44 | MC |