| SRR5560729 | caryopsis | wild_type | 0.29 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.29 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.63 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.52 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.69 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.94 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.37 | MC |
| SRR8060835 | leaf | wild_type | 1.32 | MC |
| SRR8060837 | leaf | wild_type | 0.75 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.30 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.27 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.14 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.73 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.40 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.87 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.29 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.45 | MC |
| SRR5856928 | leaf | control | 0.93 | MC |
| SRR5856929 | leaf | control | 0.83 | MC |
| SRR5856930 | leaf | salt | 0.21 | MC |
| SRR5856931 | leaf | salt | 0.26 | MC |
| SRR5856932 | leaf | salt | 0.31 | MC |
| SRR5856933 | leaf | control | 0.79 | MC |
| SRR5856934 | leaf | control | 0.40 | MC |
| SRR5856935 | leaf | control | 0.45 | MC |
| SRR5856936 | leaf | salt | 0.29 | MC |
| SRR5856937 | leaf | salt | 0.17 | MC |
| SRR5856938 | leaf | salt | 0.43 | MC |
| SRR6168973 | leaf | none (control) | 0.61 | MC |
| SRR6168975 | leaf | none (control) | 1.30 | MC |
| SRR6168981 | leaf | none (control) | 0.23 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.46 | MC |
| SRR5126148 | root | "mock,1_day" | 0.40 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.80 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.45 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.51 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.35 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.74 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.40 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.42 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.91 | MC |
| SRR4947491 | root | Al | 0.59 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.99 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.49 | MC |
| SRR6441555 | seedling | wild_type | 0.29 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.60 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.98 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.31 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.72 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.21 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.30 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.20 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.32 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.46 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.34 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.38 | MC |