| SRR4457249 | 2nd_leaf | DAH4 | 3.76 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.65 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 2.16 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 3.03 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 3.74 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 3.83 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 4.25 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.80 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.70 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.48 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 5.04 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 4.33 | MC |
| SRR358796 | callus | wt | 5.14 | MC |
| SRR358797 | callus | wt | 7.47 | MC |
| SRR5560727 | caryopsis | wild_type | 3.37 | MC |
| SRR5560728 | caryopsis | wild_type | 3.76 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.85 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.02 | MC |
| SRR7265414 | coleoptile | 4dA | 3.63 | MC |
| SRR7265416 | coleoptile | 4dN | 3.84 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.00 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.23 | MC |
| SRR7265399 | embryo | 24hN | 3.84 | MC |
| SRR2338868 | endosprem | high_temperature | 1.04 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.63 | MC |
| SRR4457232 | flag_leaf | DAH4 | 2.38 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.18 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.19 | MC |
| SRR4457236 | flag_leaf | DAH12 | 3.12 | MC |
| SRR4457238 | flag_leaf | DAH20 | 2.15 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.24 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.23 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.71 | MC |
| SRR4457245 | flag_leaf | DAH36 | 3.54 | MC |
| SRR8240824 | leaf | wild_type | 2.31 | MC |
| SRR8240818 | leaf | wild_type | 1.83 | MC |
| SRR8240819 | leaf | wild_type | 1.41 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.35 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.75 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.97 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.20 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.75 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.78 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.61 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 4.86 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.93 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.68 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.93 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.68 | MC |
| SRR1761528 | leaf | drought | 4.93 | MC |
| SRR1761530 | leaf | control | 1.68 | MC |
| SRR504365 | leaf | wt | 2.18 | MC |
| SRR6417967 | leaf | H2O_control | 3.14 | MC |
| SRR6417968 | leaf | H2O_control | 3.08 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.35 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.74 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.53 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.13 | MC |
| SRR1213692 | leaf | wt | 2.83 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 4.47 | MC |
| SRR6502090 | leaf | control | 3.89 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 3.47 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 3.91 | MC |
| SRR6502100 | leaf | control | 3.70 | MC |
| SRR6502101 | leaf | control | 3.84 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 4.76 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 7.41 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 3.76 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.30 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 3.13 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 3.63 | MC |
| SRR6168975 | leaf | none (control) | 4.75 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.54 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 3.53 | MC |
| SRR8582888 | panicle | AM | 1.29 | MC |
| SRR8582889 | panicle | AM | 1.40 | MC |
| SRR8582890 | panicle | AM | 1.77 | MC |
| SRR8582891 | panicle | PM | 2.74 | MC |
| SRR8582892 | panicle | PM | 2.66 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.95 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 4.28 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 4.59 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.27 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 4.81 | MC |
| SRR5126157 | root | "mock,7_days" | 5.41 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 5.01 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 4.85 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.39 | MC |
| SRR1213694 | root | wt | 2.95 | MC |
| SRR4947478 | root | control | 4.69 | MC |
| SRR6502091 | root | 100 mM NaCl | 4.56 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.86 | MC |
| SRR6502093 | root | 100 mM NaCl | 4.39 | MC |
| SRR6502096 | root | control | 4.23 | MC |
| SRR6502103 | root | 100 mM NaCl | 3.76 | MC |
| SRR6502104 | root | 100 mM NaCl | 2.62 | MC |
| SRR6502105 | root | 100 mM NaCl | 4.29 | MC |
| SRR6502107 | root | control | 3.70 | MC |
| SRR6502108 | root | control | 3.90 | MC |
| SRR3098741 | seedling | wt | 1.30 | MC |
| SRR3098742 | seedling | wt | 0.86 | MC |
| SRR3098743 | seedling | wt | 1.80 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.96 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.03 | MC |
| SRR1944583 | seedling | no_treatment | 3.14 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.65 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.49 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.47 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.04 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.17 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.69 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.97 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.87 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.90 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.92 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.77 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.69 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.03 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.05 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.78 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.57 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 5.05 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 4.76 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 4.98 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 7.16 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 7.25 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 5.94 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 5.24 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 5.24 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 6.83 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 4.41 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 8.04 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 6.45 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 5.00 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 4.35 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 6.64 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 7.09 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.17 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.61 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.37 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.83 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 4.39 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 2.70 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.71 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.04 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.85 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.27 | MC |