| SRR4457249 | 2nd_leaf | DAH4 | 3.67 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 3.18 | MC |
| SRR3745125 | anther | wt | 0.76 | MC |
| SRR3745126 | anther | wt | 0.98 | MC |
| SRR3745127 | anther | wt | 1.44 | MC |
| SRR358795 | callus | wt | 1.17 | MC |
| SRR358796 | callus | wt | 3.14 | MC |
| SRR358797 | callus | wt | 1.65 | MC |
| SRR358798 | callus | wt | 2.13 | MC |
| SRR5560727 | caryopsis | wild_type | 4.92 | MC |
| SRR5560728 | caryopsis | wild_type | 3.66 | MC |
| SRR5560729 | caryopsis | wild_type | 3.52 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.06 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.09 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.24 | MC |
| SRR4947495 | root | control | 0.62 | MC |
| SRR7265400 | coleoptile | 2dA | 2.40 | MC |
| SRR7265401 | coleoptile | 2dA | 2.89 | MC |
| SRR7265402 | coleoptile | 2dA | 2.11 | MC |
| SRR7265403 | coleoptile | 2dN | 1.54 | MC |
| SRR7265404 | coleoptile | 2dN | 1.43 | MC |
| SRR7265405 | coleoptile | 2dN | 1.55 | MC |
| SRR7265406 | coleoptile | 3dA | 3.44 | MC |
| SRR7265407 | coleoptile | 3dA | 3.18 | MC |
| SRR7265408 | coleoptile | 3dA | 2.12 | MC |
| SRR7265409 | coleoptile | 3dN | 2.64 | MC |
| SRR7265410 | coleoptile | 3dN | 1.16 | MC |
| SRR7265411 | coleoptile | 3dN | 1.34 | MC |
| SRR7265415 | coleoptile | 4dN | 0.87 | MC |
| SRR7265416 | coleoptile | 4dN | 1.44 | MC |
| SRR7265417 | coleoptile | 4dN | 1.51 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.42 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.57 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.10 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.32 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.34 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.17 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.28 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.93 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.13 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.07 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.13 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.11 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.89 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.24 | MC |
| SRR7265376 | embryo | 1hA | 3.17 | MC |
| SRR7265377 | embryo | 1hA | 3.46 | MC |
| SRR7265380 | embryo | 1hN | 2.13 | MC |
| SRR7265382 | embryo | 3hA | 2.48 | MC |
| SRR7265383 | embryo | 3hA | 2.21 | MC |
| SRR7265384 | embryo | 3hA | 2.24 | MC |
| SRR7265385 | embryo | 3hN | 2.86 | MC |
| SRR7265386 | embryo | 3hN | 2.76 | MC |
| SRR7265387 | embryo | 3hN | 2.70 | MC |
| SRR7265388 | embryo | 12hA | 4.08 | MC |
| SRR7265389 | embryo | 12hA | 2.91 | MC |
| SRR7265390 | embryo | 12hA | 3.31 | MC |
| SRR7265391 | embryo | 12hN | 2.93 | MC |
| SRR7265392 | embryo | 12hN | 1.36 | MC |
| SRR7265393 | embryo | 12hN | 1.21 | MC |
| SRR7265394 | embryo | 24hA | 4.19 | MC |
| SRR7265395 | embryo | 24hA | 4.52 | MC |
| SRR7265396 | embryo | 24hA | 4.50 | MC |
| SRR7265397 | embryo | 24hN | 2.12 | MC |
| SRR7265398 | embryo | 24hN | 1.80 | MC |
| SRR7265399 | embryo | 24hN | 1.33 | MC |
| SRR2338867 | endosprem | control | 1.35 | MC |
| SRR2338868 | endosprem | high_temperature | 0.97 | MC |
| SRR2338869 | endosprem | high_temperature | 1.47 | MC |
| SRR976168 | flag_leaf | wild_type | 1.67 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.14 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.71 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.21 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.24 | MC |
| SRR4457235 | flag_leaf | DAH12 | 2.70 | MC |
| SRR4457236 | flag_leaf | DAH12 | 2.02 | MC |
| SRR8060835 | leaf | wild_type | 2.35 | MC |
| SRR8060836 | leaf | wild_type | 2.01 | MC |
| SRR8060837 | leaf | wild_type | 1.70 | MC |
| SRR8240824 | leaf | wild_type | 1.00 | MC |
| SRR8240825 | leaf | wild_type | 0.29 | MC |
| SRR8240826 | leaf | wild_type | 0.58 | MC |
| SRR8240818 | leaf | wild_type | 1.34 | MC |
| SRR8240819 | leaf | wild_type | 2.03 | MC |
| SRR8240820 | leaf | wild_type | 1.77 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.94 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.95 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.48 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.47 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.39 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 5.10 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 4.06 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.81 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.54 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.81 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.54 | MC |
| SRR1761530 | leaf | control | 1.81 | MC |
| SRR1761531 | leaf | control | 1.54 | MC |
| SRR6417967 | leaf | H2O_control | 3.86 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.15 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.11 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.42 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.44 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.74 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.10 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.37 | MC |
| SRR8611901 | leaf | Non-inoculated | 2.67 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.92 | MC |
| SRR6502088 | leaf | control | 3.17 | MC |
| SRR6502089 | leaf | control | 3.98 | MC |
| SRR6502090 | leaf | control | 3.58 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.78 | MC |
| SRR6502100 | leaf | control | 2.66 | MC |
| SRR6502101 | leaf | control | 2.18 | MC |
| SRR6502102 | leaf | control | 3.00 | MC |
| SRR5856927 | leaf | control | 0.80 | MC |
| SRR5856928 | leaf | control | 1.18 | MC |
| SRR5856929 | leaf | control | 1.28 | MC |
| SRR5856933 | leaf | control | 1.13 | MC |
| SRR5856934 | leaf | control | 1.30 | MC |
| SRR5856935 | leaf | control | 1.62 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 5.53 | MC |
| SRR6168973 | leaf | none (control) | 3.63 | MC |
| SRR6168974 | leaf | none (control) | 4.26 | MC |
| SRR6168975 | leaf | none (control) | 4.28 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.63 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.99 | MC |
| SRR8582888 | panicle | AM | 1.74 | MC |
| SRR8582890 | panicle | AM | 1.98 | MC |
| SRR8582892 | panicle | PM | 7.92 | MC |
| SRR5110429 | panicle | Dawn | 3.39 | MC |
| SRR5110430 | panicle | Dawn | 3.08 | MC |
| SRR5110431 | panicle | Dawn | 3.30 | MC |
| SRR5110432 | panicle | Dawn | 2.31 | MC |
| SRR4947496 | root | control | 0.72 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 2.78 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 3.67 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.40 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.15 | MC |
| SRR5110437 | panicle | Dawn + 7h | 4.11 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.30 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.35 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.04 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.15 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 3.16 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.36 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 3.61 | MC |
| SRR5110445 | panicle | Dusk | 3.47 | MC |
| SRR5110446 | panicle | Dusk | 4.00 | MC |
| SRR5110448 | panicle | Dusk | 4.44 | MC |
| SRR5110449 | panicle | Dawn + 14h | 2.89 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.98 | MC |
| SRR5110451 | panicle | Dawn + 14h | 3.63 | MC |
| SRR5110452 | panicle | Dawn + 14h | 4.91 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.12 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 2.33 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 2.70 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 5.00 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.07 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.69 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.29 | MC |
| SRR5110460 | panicle | Dawn + 21h | 3.49 | MC |
| SRR1633182 | panicle | WT | 0.85 | MC |
| SRR1633185 | panicle | WT | 1.38 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.63 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.65 | MC |
| SRR5126147 | root | "mock,1_day" | 1.57 | MC |
| SRR5126148 | root | "mock,1_day" | 1.07 | MC |
| SRR5126149 | root | "mock,1_day" | 3.07 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.45 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.67 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.52 | MC |
| SRR5126153 | root | "mock,7_days" | 1.30 | MC |
| SRR5126155 | root | "mock,7_days" | 1.61 | MC |
| SRR5126157 | root | "mock,7_days" | 2.46 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.71 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.65 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 2.38 | MC |
| SRR5126165 | root | "mock,14_days" | 1.82 | MC |
| SRR5126167 | root | "mock,14_days" | 2.00 | MC |
| SRR5126169 | root | "mock,14_days" | 1.88 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.62 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.64 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.98 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.25 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.49 | MC |
| SRR1213694 | root | wt | 1.55 | MC |
| SRR4947478 | root | control | 0.61 | MC |
| SRR4947479 | root | control | 0.64 | MC |
| SRR4947480 | root | control | 0.66 | MC |
| SRR4947481 | root | control | 1.10 | MC |
| SRR4947482 | root | Al | 0.61 | MC |
| SRR4947484 | root | Al | 0.59 | MC |
| SRR4947485 | root | Al | 1.12 | MC |
| SRR4947488 | root | control | 0.55 | MC |
| SRR4947491 | root | Al | 1.14 | MC |
| SRR4947492 | root | Al | 0.59 | MC |
| SRR4947493 | root | Al | 0.54 | MC |
| SRR4947494 | root | control | 0.89 | MC |
| SRR4947497 | root | control | 0.70 | MC |
| SRR4947498 | root | Al | 1.27 | MC |
| SRR4947499 | root | Al | 1.50 | MC |
| SRR4947500 | root | Al | 0.91 | MC |
| SRR4947501 | root | Al | 1.58 | MC |
| SRR4947502 | root | control | 1.17 | MC |
| SRR4947503 | root | control | 0.95 | MC |
| SRR4947504 | root | control | 0.85 | MC |
| SRR4947506 | root | Al | 0.95 | MC |
| SRR4947507 | root | Al | 1.48 | MC |
| SRR4947508 | root | Al | 1.14 | MC |
| SRR4947509 | root | Al | 0.62 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.73 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.74 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.99 | MC |
| SRR6502094 | root | control | 0.52 | MC |
| SRR6502095 | root | control | 1.03 | MC |
| SRR6502096 | root | control | 0.37 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.41 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.20 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.22 | MC |
| SRR6502106 | root | control | 0.89 | MC |
| SRR6502107 | root | control | 0.88 | MC |
| SRR6502108 | root | control | 1.06 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.86 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.90 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.03 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.04 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.37 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.48 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.36 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.23 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.96 | MC |
| SRR6441554 | seedling | wild_type | 0.87 | MC |
| SRR6441555 | seedling | wild_type | 1.38 | MC |
| SRR2154086 | seedling | wt | 3.28 | MC |
| SRR2154082 | seedling | wt | 1.84 | MC |
| SRR2154084 | seedling | wt | 2.58 | MC |
| SRR2154085 | seedling | wt | 2.73 | MC |
| SRR2154087 | seedling | wt | 3.93 | MC |
| SRR3098741 | seedling | wt | 2.41 | MC |
| SRR3098742 | seedling | wt | 1.81 | MC |
| SRR3098743 | seedling | wt | 2.11 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.63 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.53 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.22 | MC |
| SRR1944583 | seedling | no_treatment | 1.68 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.60 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.00 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.94 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.01 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.36 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.12 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.18 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.69 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.06 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.73 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.45 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.98 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.36 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.40 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.34 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.89 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.32 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.58 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.72 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.75 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 5.04 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 3.97 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 5.70 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 5.25 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 3.71 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 5.65 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.15 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.43 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.79 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 3.71 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 3.70 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 3.56 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 5.17 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 4.38 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 6.17 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 4.13 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 5.06 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 3.63 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 5.48 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 5.15 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 4.40 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 5.52 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 3.06 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 4.28 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.57 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.88 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.33 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.23 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.14 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.28 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.14 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 3.27 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.67 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.81 | MC |