| SRR4457249 | 2nd_leaf | DAH4 | 1.43 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.62 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.98 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.63 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.31 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.23 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.13 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.81 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.45 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.13 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.76 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.24 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.32 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 2.46 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.43 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.93 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.31 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.39 | MC |
| SRR3745127 | anther | wt | 4.72 | MC |
| SRR6320473 | carpel | wt | 5.84 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.89 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.38 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.23 | MC |
| SRR7265408 | coleoptile | 3dA | 2.66 | MC |
| SRR7265413 | coleoptile | 4dA | 3.36 | MC |
| SRR7265414 | coleoptile | 4dA | 3.63 | MC |
| SRR7265416 | coleoptile | 4dN | 3.19 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.03 | MC |
| SRR7265376 | embryo | 1hA | 3.25 | MC |
| SRR2338866 | endosprem | control | 3.05 | MC |
| SRR2338867 | endosprem | control | 2.02 | MC |
| SRR976168 | flag_leaf | wild_type | 2.95 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.76 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.35 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.35 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.18 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.31 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.59 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.50 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.84 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.53 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.59 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.44 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.55 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.71 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.17 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.76 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.31 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.06 | MC |
| SRR8060835 | leaf | wild_type | 1.59 | MC |
| SRR8060836 | leaf | wild_type | 1.68 | MC |
| SRR8060837 | leaf | wild_type | 1.04 | MC |
| SRR8240819 | leaf | wild_type | 0.20 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.96 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.63 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.09 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.92 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.24 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.69 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.93 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.88 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.47 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.74 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.59 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.15 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.43 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.39 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 1.71 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.61 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.50 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.19 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.49 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.09 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.64 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.93 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.56 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.64 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.41 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.43 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.73 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.65 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 6.10 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.68 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.68 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.02 | MC |
| SRR6417967 | leaf | H2O_control | 2.81 | MC |
| SRR6417968 | leaf | H2O_control | 1.27 | MC |
| SRR6417969 | leaf | H2O_control | 1.85 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.47 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.77 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.62 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 2.49 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.54 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.88 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.19 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.95 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.56 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.35 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.48 | MC |
| SRR1213692 | leaf | wt | 1.00 | MC |
| SRR1213693 | leaf | wt | 1.77 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 3.43 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.65 | MC |
| SRR6502088 | leaf | control | 3.86 | MC |
| SRR6502089 | leaf | control | 2.51 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 4.50 | MC |
| SRR6502100 | leaf | control | 2.79 | MC |
| SRR6502101 | leaf | control | 2.88 | MC |
| SRR5856928 | leaf | control | 0.33 | MC |
| SRR5856930 | leaf | salt | 1.77 | MC |
| SRR5856931 | leaf | salt | 1.47 | MC |
| SRR5856932 | leaf | salt | 1.91 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.40 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.41 | MC |
| SRR6168980 | leaf | none (control) | 0.56 | MC |
| SRR6168981 | leaf | none (control) | 2.14 | MC |
| SRR8582888 | panicle | AM | 1.18 | MC |
| SRR8582889 | panicle | AM | 0.70 | MC |
| SRR8582890 | panicle | AM | 1.10 | MC |
| SRR8582892 | panicle | PM | 2.74 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.18 | MC |
| SRR5110440 | panicle | Dawn + 7h | 5.22 | MC |
| SRR5110449 | panicle | Dawn + 14h | 6.06 | MC |
| SRR5110460 | panicle | Dawn + 21h | 4.39 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.79 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.93 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.32 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 3.51 | MC |
| SRR5126147 | root | "mock,1_day" | 1.34 | MC |
| SRR5126148 | root | "mock,1_day" | 2.32 | MC |
| SRR5126149 | root | "mock,1_day" | 3.07 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.14 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.51 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.03 | MC |
| SRR5126157 | root | "mock,7_days" | 3.06 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.55 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.24 | MC |
| SRR1213694 | root | wt | 2.08 | MC |
| SRR4947485 | root | Al | 3.60 | MC |
| SRR4947493 | root | Al | 3.83 | MC |
| SRR4947494 | root | control | 3.16 | MC |
| SRR4947507 | root | Al | 5.38 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.90 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.75 | MC |
| SRR1740428 | root_meristematic_zone | wt | 3.92 | MC |
| SRR1740429 | root_meristematic_zone | wt | 3.32 | MC |
| SRR6441554 | seedling | wild_type | 2.64 | MC |
| SRR6441555 | seedling | wild_type | 2.89 | MC |
| SRR3098741 | seedling | wt | 1.48 | MC |
| SRR3098742 | seedling | wt | 1.53 | MC |
| SRR3098743 | seedling | wt | 1.67 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.69 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.52 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.52 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.89 | MC |
| SRR358791 | seedling | wt | 4.32 | MC |
| SRR358792 | seedling | wt | 6.81 | MC |
| SRR358793 | seedling | wt | 6.73 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.16 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.42 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.13 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.40 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.21 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.26 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.55 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.06 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.31 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.42 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.54 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.72 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 3.95 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 3.29 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.26 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.57 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.93 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.77 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.20 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.57 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.59 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.99 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.44 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.87 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.16 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.52 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.41 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.67 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.02 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 6.31 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.39 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 7.85 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 7.63 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 5.37 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 6.70 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 3.90 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 5.84 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 4.29 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 7.79 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 4.91 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 4.66 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 6.65 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 8.62 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 7.02 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 4.28 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 6.91 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.58 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.25 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.75 | MC |