| SRR4457249 | 2nd_leaf | DAH4 | 0.90 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.45 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.35 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.57 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.34 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.61 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.48 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.57 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.77 | MC |
| SRR6320473 | carpel | wt | 1.84 | MC |
| SRR5560729 | caryopsis | wild_type | 0.35 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.67 | MC |
| SRR7265416 | coleoptile | 4dN | 4.13 | MC |
| SRR7265417 | coleoptile | 4dN | 3.06 | MC |
| SRR7265399 | embryo | 24hN | 4.30 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.28 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.35 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.36 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.83 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.71 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.81 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.43 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.69 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.47 | MC |
| SRR1213691 | flower | wt | 0.31 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.82 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.96 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.43 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.37 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.28 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.73 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.54 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.38 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.70 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.59 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.58 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.74 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.31 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.67 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.18 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.89 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.89 | MC |
| SRR1761529 | leaf | drought | 0.89 | MC |
| SRR504365 | leaf | wt | 0.22 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.15 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.97 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.51 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.60 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.70 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.27 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.33 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.24 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.18 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.45 | MC |
| SRR6502100 | leaf | control | 0.35 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.38 | MC |
| SRR6168979 | leaf | none (control) | 1.75 | MC |
| SRR5110429 | panicle | Dawn | 0.91 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.83 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.30 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.92 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.35 | MC |
| SRR5110445 | panicle | Dusk | 0.89 | MC |
| SRR5110448 | panicle | Dusk | 0.54 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.26 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.85 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.60 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.13 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.95 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.52 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.26 | MC |
| SRR1633182 | panicle | WT | 1.21 | MC |
| SRR1633185 | panicle | WT | 2.89 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.37 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.45 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.17 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.65 | MC |
| SRR5126147 | root | "mock,1_day" | 0.44 | MC |
| SRR5126149 | root | "mock,1_day" | 1.40 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.53 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.58 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.40 | MC |
| SRR5126153 | root | "mock,7_days" | 0.81 | MC |
| SRR5126155 | root | "mock,7_days" | 0.66 | MC |
| SRR5126157 | root | "mock,7_days" | 0.59 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.62 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.34 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.87 | MC |
| SRR5126165 | root | "mock,14_days" | 1.80 | MC |
| SRR5126167 | root | "mock,14_days" | 1.15 | MC |
| SRR5126169 | root | "mock,14_days" | 0.39 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.17 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.05 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.52 | MC |
| SRR1213694 | root | wt | 0.22 | MC |
| SRR1213695 | root | wt | 0.27 | MC |
| SRR4947499 | root | Al | 0.65 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.96 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.39 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.72 | MC |
| SRR6502106 | root | control | 0.72 | MC |
| SRR6502107 | root | control | 1.01 | MC |
| SRR6441554 | seedling | wild_type | 0.28 | MC |
| SRR6441555 | seedling | wild_type | 0.43 | MC |
| SRR2154083 | seedling | wt | 0.65 | MC |
| SRR2154087 | seedling | wt | 0.45 | MC |
| SRR3098741 | seedling | wt | 0.24 | MC |
| SRR3098742 | seedling | wt | 0.30 | MC |
| SRR3098743 | seedling | wt | 0.53 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.44 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.74 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.90 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.38 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.22 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.93 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.38 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.73 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.46 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.56 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 2.42 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.55 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.49 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.51 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.56 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.75 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.29 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.14 | MC |