| SRR3745125 | anther | wt | 1.71 | MC |
| SRR3745126 | anther | wt | 2.75 | MC |
| SRR3745127 | anther | wt | 2.57 | MC |
| SRR358795 | callus | wt | 2.67 | MC |
| SRR358796 | callus | wt | 1.57 | MC |
| SRR358797 | callus | wt | 1.65 | MC |
| SRR358798 | callus | wt | 2.04 | MC |
| SRR5560727 | caryopsis | wild_type | 3.03 | MC |
| SRR5560729 | caryopsis | wild_type | 1.86 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 2.97 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.74 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.89 | MC |
| SRR7265400 | coleoptile | 2dA | 1.01 | MC |
| SRR7265401 | coleoptile | 2dA | 0.96 | MC |
| SRR7265402 | coleoptile | 2dA | 1.18 | MC |
| SRR7265403 | coleoptile | 2dN | 1.12 | MC |
| SRR7265404 | coleoptile | 2dN | 1.17 | MC |
| SRR7265405 | coleoptile | 2dN | 1.10 | MC |
| SRR7265406 | coleoptile | 3dA | 0.58 | MC |
| SRR7265407 | coleoptile | 3dA | 0.42 | MC |
| SRR7265409 | coleoptile | 3dN | 0.54 | MC |
| SRR7265410 | coleoptile | 3dN | 0.45 | MC |
| SRR7265411 | coleoptile | 3dN | 0.88 | MC |
| SRR7265413 | coleoptile | 4dA | 0.50 | MC |
| SRR7265416 | coleoptile | 4dN | 0.47 | MC |
| SRR7265417 | coleoptile | 4dN | 0.68 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.10 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.71 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.36 | MC |
| SRR7265381 | embryo | 1hN | 0.25 | MC |
| SRR7265387 | embryo | 3hN | 0.26 | MC |
| SRR7265388 | embryo | 12hA | 4.47 | MC |
| SRR7265389 | embryo | 12hA | 2.81 | MC |
| SRR7265390 | embryo | 12hA | 3.01 | MC |
| SRR7265391 | embryo | 12hN | 2.68 | MC |
| SRR7265392 | embryo | 12hN | 1.59 | MC |
| SRR7265393 | embryo | 12hN | 2.14 | MC |
| SRR7265394 | embryo | 24hA | 2.53 | MC |
| SRR7265395 | embryo | 24hA | 1.80 | MC |
| SRR7265396 | embryo | 24hA | 1.58 | MC |
| SRR7265397 | embryo | 24hN | 1.07 | MC |
| SRR7265398 | embryo | 24hN | 2.58 | MC |
| SRR7265399 | embryo | 24hN | 2.63 | MC |
| SRR2338869 | endosprem | high_temperature | 1.28 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.24 | MC |
| SRR1213691 | flower | wt | 2.19 | MC |
| SRR8240824 | leaf | wild_type | 0.37 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.40 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.69 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.42 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.94 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.69 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.21 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.73 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.54 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.41 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.24 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.03 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.09 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.21 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.56 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.80 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.10 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.08 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.26 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.95 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.24 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.85 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.22 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.12 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.78 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.42 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.10 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.49 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.80 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.39 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.32 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.92 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.45 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.24 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.38 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.50 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.51 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.50 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.51 | MC |
| SRR1761528 | leaf | drought | 0.50 | MC |
| SRR1761529 | leaf | drought | 0.51 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.47 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.30 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.35 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.65 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.81 | MC |
| SRR8611901 | leaf | Non-inoculated | 2.34 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.62 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.60 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.90 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.39 | MC |
| SRR1213692 | leaf | wt | 0.49 | MC |
| SRR1213693 | leaf | wt | 0.35 | MC |
| SRR8582891 | panicle | PM | 1.43 | MC |
| SRR8582893 | panicle | PM | 1.53 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.33 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.10 | MC |
| SRR5126153 | root | "mock,7_days" | 2.36 | MC |
| SRR5126157 | root | "mock,7_days" | 2.05 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.71 | MC |
| SRR5126165 | root | "mock,14_days" | 2.23 | MC |
| SRR5126167 | root | "mock,14_days" | 1.73 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 4.39 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 4.52 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 3.16 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.70 | MC |
| SRR1213694 | root | wt | 0.85 | MC |
| SRR1213695 | root | wt | 0.18 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.56 | MC |
| SRR1740431 | root_elongation_zone | wt | 3.19 | MC |
| SRR1740428 | root_meristematic_zone | wt | 4.30 | MC |
| SRR6441554 | seedling | wild_type | 1.70 | MC |
| SRR6441555 | seedling | wild_type | 1.45 | MC |
| SRR3098741 | seedling | wt | 0.97 | MC |
| SRR3098742 | seedling | wt | 0.46 | MC |
| SRR3098743 | seedling | wt | 0.32 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.86 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.80 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.29 | MC |
| SRR1944583 | seedling | no_treatment | 0.44 | MC |
| SRR358791 | seedling | wt | 0.86 | MC |
| SRR358794 | seedling | wt | 0.95 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.19 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.35 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.46 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.16 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.87 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.09 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.81 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.48 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.20 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 3.28 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.79 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.49 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.63 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.64 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.41 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.27 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.51 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.70 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.41 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.08 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.48 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.29 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.79 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.19 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.99 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 0.72 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.15 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.77 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.02 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.84 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 3.33 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.08 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.09 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.95 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.08 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.64 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 2.40 | MC |