| SRR4457251 | 2nd_leaf | DAH4 | 0.56 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.33 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.53 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.15 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 3.14 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.80 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.18 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.86 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.92 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.50 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 3.33 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 3.48 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.92 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.47 | MC |
| SRR7265401 | coleoptile | 2dA | 0.99 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.21 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.09 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.59 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.62 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.19 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.64 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.92 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.99 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.01 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.72 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.09 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.78 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.10 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.34 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.93 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.77 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.53 | MC |
| SRR1213691 | flower | wt | 0.83 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.54 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.52 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.57 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.10 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.38 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.67 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.17 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.81 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.52 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.42 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.13 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.62 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.95 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.82 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.82 | MC |
| SRR1761531 | leaf | control | 0.82 | MC |
| SRR6417968 | leaf | H2O_control | 0.73 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.12 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.80 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.36 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.98 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.03 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.46 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.34 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.70 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.74 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.98 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.31 | MC |
| SRR1213692 | leaf | wt | 2.08 | MC |
| SRR1213693 | leaf | wt | 0.41 | MC |
| SRR8582888 | panicle | AM | 0.46 | MC |
| SRR8582889 | panicle | AM | 0.50 | MC |
| SRR8582890 | panicle | AM | 0.88 | MC |
| SRR8582891 | panicle | PM | 2.77 | MC |
| SRR8582892 | panicle | PM | 2.35 | MC |
| SRR8582893 | panicle | PM | 3.66 | MC |
| SRR5126147 | root | "mock,1_day" | 2.37 | MC |
| SRR5126148 | root | "mock,1_day" | 1.72 | MC |
| SRR5126149 | root | "mock,1_day" | 0.49 | MC |
| SRR5126153 | root | "mock,7_days" | 1.92 | MC |
| SRR5126155 | root | "mock,7_days" | 1.48 | MC |
| SRR5126165 | root | "mock,14_days" | 1.16 | MC |
| SRR5126167 | root | "mock,14_days" | 1.68 | MC |
| SRR5126169 | root | "mock,14_days" | 1.26 | MC |
| SRR1213695 | root | wt | 0.33 | MC |
| SRR6441554 | seedling | wild_type | 0.33 | MC |
| SRR3098741 | seedling | wt | 1.00 | MC |
| SRR3098742 | seedling | wt | 1.57 | MC |
| SRR3098743 | seedling | wt | 2.30 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.05 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.09 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.05 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.17 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.15 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.73 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.08 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.07 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.14 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.12 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.00 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.33 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.92 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.91 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.49 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.77 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.45 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.39 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.84 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.62 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.49 | MC |