| SRR4457262 | 2nd_leaf | DAH36 | 4.52 | MC |
| SRR6320473 | carpel | wt | 2.15 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.64 | MC |
| SRR7265405 | coleoptile | 2dN | 3.09 | MC |
| SRR7265409 | coleoptile | 3dN | 3.20 | MC |
| SRR7265410 | coleoptile | 3dN | 3.12 | MC |
| SRR7265411 | coleoptile | 3dN | 2.44 | MC |
| SRR7265414 | coleoptile | 4dA | 1.96 | MC |
| SRR7265415 | coleoptile | 4dN | 3.24 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.80 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.67 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.35 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.04 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.05 | MC |
| SRR7265383 | embryo | 3hA | 3.02 | MC |
| SRR7265388 | embryo | 12hA | 4.03 | MC |
| SRR7265389 | embryo | 12hA | 4.77 | MC |
| SRR7265391 | embryo | 12hN | 4.24 | MC |
| SRR7265398 | embryo | 24hN | 2.37 | MC |
| SRR2338868 | endosprem | high_temperature | 0.54 | MC |
| SRR2338869 | endosprem | high_temperature | 0.55 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.53 | MC |
| SRR4457236 | flag_leaf | DAH12 | 2.18 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.81 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.91 | MC |
| SRR8060836 | leaf | wild_type | 2.01 | MC |
| SRR8240826 | leaf | wild_type | 2.01 | MC |
| SRR8240819 | leaf | wild_type | 0.24 | MC |
| SRR8240820 | leaf | wild_type | 2.25 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.29 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.96 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.24 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.16 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 3.45 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.02 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 3.61 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.37 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.62 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.66 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.67 | MC |
| SRR6417967 | leaf | H2O_control | 3.76 | MC |
| SRR6417968 | leaf | H2O_control | 3.45 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.90 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 4.68 | MC |
| SRR6502100 | leaf | control | 1.27 | MC |
| SRR5856927 | leaf | control | 1.77 | MC |
| SRR5856930 | leaf | salt | 1.31 | MC |
| SRR5856932 | leaf | salt | 0.36 | MC |
| SRR5856937 | leaf | salt | 0.42 | MC |
| SRR5856938 | leaf | salt | 0.39 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 6.07 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 9.89 | MC |
| SRR6168973 | leaf | none (control) | 3.14 | MC |
| SRR6168975 | leaf | none (control) | 2.26 | MC |
| SRR6168980 | leaf | none (control) | 0.82 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.82 | MC |
| SRR8582890 | panicle | AM | 1.83 | MC |
| SRR5110431 | panicle | Dawn | 3.59 | MC |
| SRR5110432 | panicle | Dawn | 1.83 | MC |
| SRR4947496 | root | control | 3.28 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.38 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.12 | MC |
| SRR5110438 | panicle | Dawn + 7h | 3.32 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 2.87 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 4.25 | MC |
| SRR5110445 | panicle | Dusk | 3.55 | MC |
| SRR5110446 | panicle | Dusk | 3.39 | MC |
| SRR5110447 | panicle | Dusk | 3.11 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.73 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 2.09 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 2.78 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 2.07 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.95 | MC |
| SRR5110459 | panicle | Dawn + 21h | 1.99 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.31 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 4.31 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 5.21 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.68 | MC |
| SRR4947478 | root | control | 1.06 | MC |
| SRR4947481 | root | control | 4.96 | MC |
| SRR4947483 | root | Al | 1.40 | MC |
| SRR4947484 | root | Al | 1.80 | MC |
| SRR4947488 | root | control | 1.60 | MC |
| SRR4947491 | root | Al | 3.67 | MC |
| SRR4947493 | root | Al | 4.61 | MC |
| SRR4947497 | root | control | 5.15 | MC |
| SRR4947500 | root | Al | 4.73 | MC |
| SRR4947504 | root | control | 2.97 | MC |
| SRR4947505 | root | control | 3.46 | MC |
| SRR4947506 | root | Al | 2.68 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.10 | MC |
| SRR6502105 | root | 100 mM NaCl | 2.13 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.99 | MC |
| SRR2154082 | seedling | wt | 1.38 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.29 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.78 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.04 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.13 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.12 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.28 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.72 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.93 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.01 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.11 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 8.46 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 3.96 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 6.04 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 7.54 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.39 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 4.04 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 4.98 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 12.92 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.67 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.69 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.25 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.41 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.00 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 2.73 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 2.50 | MC |